Basic Information
Locus ID:
nbisL1-mrna-10858
Species & Taxonomic ID:
Ceriops zippeliana & 413951
Genome Assembly:
GCA_037897445.1
Short Name:
CAX5
Description:
Belongs to the Ca(2 ) cation antiporter (CaCA) (TC 2.A.19) family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 000062F_pilon | 526811 | 532231 | - | nbisL1-mrna-10858 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.46 | 47,636.00 Da | 38.57 | 117.36 | 0.47 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01699 | Sodium/calcium exchanger protein | 318 | 436 | 3.3E-16 | IPR004837 |
| Pfam | PF01699 | Sodium/calcium exchanger protein | 130 | 285 | 1.4E-21 | IPR004837 |
| Gene3D | G3DSA:1.20.1420.30 | - | 302 | 439 | 6.1E-13 | IPR044880 |
| Gene3D | G3DSA:1.20.1420.30 | - | 159 | 298 | 1.6E-15 | IPR044880 |
| TIGRFAM | TIGR00846 | caca2: calcium/proton exchanger | 95 | 437 | 1.5E-106 | - |
| TIGRFAM | TIGR00378 | cax: calcium/proton exchanger | 115 | 434 | 2.9E-89 | IPR004798 |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G55730.1 | cation exchanger 5. member of Low affinity calcium antiporter CAX2 family | 0 |
| RefSeq | XP_021681745.1 | vacuolar cation/proton exchanger 5-like [Hevea brasiliensis] | 0 |
| Q39254 | Vacuolar cation/proton exchanger 2 OS=Arabidopsis thaliana OX=3702 GN=CAX2 PE=1 SV=2 | 0 | |
| TrEMBL | B9SEZ0 | Vacuolar cation/proton exchanger OS=Ricinus communis OX=3988 GN=RCOM_1211410 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology