Basic Information
Locus ID:
nbisL1-mrna-10837
Species & Taxonomic ID:
Carallia pectinifolia & 98586
Genome Assembly:
GCA_037832335.1
Description:
disease resistance
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr05 | 5356198 | 5362223 | + | nbisL1-mrna-10837 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.19 | 151,256.27 Da | 39.28 | 100.71 | -0.14 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00931 | NB-ARC domain | 168 | 398 | 5.9E-40 | IPR002182 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 157 | 413 | 1.77E-42 | IPR027417 |
| SUPERFAMILY | SSF52058 | L domain-like | 473 | 870 | 2.38E-29 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 914 | 1312 | 1.87E-17 | - |
| Gene3D | G3DSA:1.10.8.430 | - | 313 | 402 | 1.6E-14 | IPR042197 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 919 | 1133 | 3.4E-14 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 511 | 911 | 6.5E-36 | IPR032675 |
| Gene3D | G3DSA:3.40.50.300 | - | 152 | 312 | 9.1E-27 | IPR027417 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1134 | 1320 | 6.5E-10 | IPR032675 |
| PRINTS | PR00364 | Disease resistance protein signature | 254 | 268 | 1.6E-18 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 181 | 196 | 1.6E-18 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 347 | 361 | 1.6E-18 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 623 | 639 | 1.6E-18 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1313 | 1332 | - | - |
| Coils | Coil | Coil | 75 | 98 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G27190.1 | NB-ARC domain-containing disease resistance protein. | 0 |
| RefSeq | XP_015576964.2 | - | 0 |
| Q9T048 | Disease resistance protein At4g27190 OS=Arabidopsis thaliana OX=3702 GN=At4g27190 PE=2 SV=1 | 0 | |
| TrEMBL | A0A2P2MMH8 | Putative disease resistance protein At4g27220 OS=Rhizophora mucronata OX=61149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology