Basic Information
Locus ID:
nbisL1-mrna-10835
Species & Taxonomic ID:
Hibiscus hamabo Siebold & Zucc. & 1841
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 11387203 | 11391574 | + | nbisL1-mrna-10835 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.05 | 29,746.68 Da | 56.77 | 81.09 | -0.27 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 10 | 72 | 1.7E-13 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 5 | 141 | 1.71E-26 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 76 | 121 | 3.3E-6 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 2 | 75 | 3.8E-17 | - |
| SMART | SM00219 | tyrkin_6 | 1 | 110 | 0.003 | IPR020635 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 175 | 14.20963 | IPR000719 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G50180.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_052485590.1 | serine/threonine-protein kinase STY13 isoform X2 [Gossypium raimondii] | 0 |
| Q9ZQ31 | Serine/threonine-protein kinase STY13 OS=Arabidopsis thaliana OX=3702 GN=STY13 PE=1 SV=2 | 0 | |
| TrEMBL | A0A7J9MQ66 | Protein kinase domain-containing protein OS=Gossypium schwendimanii OX=34291 GN=Goshw_027061 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology