Basic Information
Locus ID:
nbisL1-mrna-10828
Species & Taxonomic ID:
Rhizophora mangle & 40031
Genome Assembly:
GCA_037832345.1
Description:
Agamous-like MADS-box protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 002113F_pilon | 2488605 | 2490339 | - | nbisL1-mrna-10828 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.25 | 17,943.54 Da | 64.52 | 84.67 | -1.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01486 | K-box region | 24 | 109 | 5.7E-26 | IPR002487 |
| ProSiteProfiles | PS51297 | K-box domain profile. | 26 | 116 | 14.725817 | IPR002487 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 105 | 133 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 105 | 152 | - | - |
| Coils | Coil | Coil | 60 | 109 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G22950.1 | AGAMOUS-like 19. MADS-box protein AGL19 | 0 |
| RefSeq | XP_034894886.1 | - | 0 |
| O82743 | Agamous-like MADS-box protein AGL19 OS=Arabidopsis thaliana OX=3702 GN=AGL19 PE=1 SV=1 | 0 | |
| TrEMBL | A0A4U5PKZ1 | - | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology