Basic Information
Locus ID:
nbisL1-mrna-10817
Species & Taxonomic ID:
Hibiscus hamabo Siebold & Zucc. & 1841
Description:
Serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 11154849 | 11157963 | - | nbisL1-mrna-10817 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.80 | 42,130.50 Da | 46.15 | 77.35 | -0.48 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 81 | 349 | 4.22557E-116 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 77 | 349 | 3.7E-64 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 59 | 349 | 3.69E-78 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 175 | 366 | 3.3E-62 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 62 | 158 | 3.9E-20 | - |
| SMART | SM00220 | serkin_6 | 75 | 352 | 2.6E-62 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 75 | 352 | 41.813332 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 216 | 228 | - | IPR008271 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 210 | 228 | 4.1E-15 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 172 | 185 | 4.1E-15 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 276 | 298 | 4.1E-15 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 320 | 342 | 4.1E-15 | IPR001245 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 30 | 51 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 30 | 65 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G01490.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_021299263.1 | serine/threonine-protein kinase HT1 [Herrania umbratica] | 0 |
| Q9SSA4 | Serine/threonine-protein kinase 54 OS=Arabidopsis thaliana OX=3702 GN=CBC1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A061EBQ5 | Kinase superfamily protein isoform 2 OS=Theobroma cacao OX=3641 GN=TCM_016869 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology