Basic Information
Locus ID:
nbisL1-mrna-10794
Species & Taxonomic ID:
Rhizophora apiculata & 106626
Genome Assembly:
GCA_037832385.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr14 | 6137275 | 6140465 | + | nbisL1-mrna-10794 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.63 | 96,026.55 Da | 40.19 | 89.00 | -0.20 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 528 | 801 | 1.09795E-97 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 525 | 797 | 5.5E-48 | IPR001245 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 272 | 307 | 1.8E-4 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 329 | 369 | 1.9E-7 | IPR001611 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 498 | 807 | 1.69E-79 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 22 | 392 | 3.33E-40 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 600 | 809 | 2.5E-57 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 484 | 599 | 2.9E-35 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 269 | 394 | 3.7E-34 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 6 | 266 | 9.7E-61 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 332 | 355 | 11.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 224 | 246 | 280.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 51 | 74 | 0.015 | IPR003591 |
| SMART | SM00220 | serkin_6 | 522 | 802 | 2.1E-41 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 126 | 149 | 140.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 522 | 802 | 40.046581 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 528 | 550 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 647 | 659 | - | IPR008271 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 335 | 348 | 9.6E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 356 | 369 | 9.6E-5 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 389 | 420 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 401 | 420 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 837 | 878 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 837 | 865 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G66150.1 | transmembrane kinase 1. receptor-like transmembrane kinase I (TMK1) | 0 |
| RefSeq | XP_021641290.1 | receptor protein kinase TMK1-like isoform X1 [Hevea brasiliensis] | 0 |
| P43298 | Receptor protein kinase TMK1 OS=Arabidopsis thaliana OX=3702 GN=TMK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2P2L8F0 | Receptor protein kinase OS=Rhizophora mucronata OX=61149 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology