Basic Information
Locus ID:
nbisL1-mrna-10777
Species & Taxonomic ID:
Hibiscus hamabo Siebold & Zucc. & 1841
Description:
WRKY Transcription Factor
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 10748110 | 10751565 | - | nbisL1-mrna-10777 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.64 | 55,948.97 Da | 51.62 | 60.82 | -0.70 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03106 | WRKY DNA -binding domain | 400 | 457 | 4.1E-25 | IPR003657 |
| Pfam | PF03106 | WRKY DNA -binding domain | 226 | 282 | 1.0E-24 | IPR003657 |
| SUPERFAMILY | SSF118290 | WRKY DNA-binding domain | 222 | 284 | 1.15E-25 | IPR036576 |
| SUPERFAMILY | SSF118290 | WRKY DNA-binding domain | 391 | 459 | 2.48E-28 | IPR036576 |
| Gene3D | G3DSA:2.20.25.80 | WRKY domain | 214 | 285 | 7.3E-27 | IPR036576 |
| Gene3D | G3DSA:2.20.25.80 | WRKY domain | 384 | 460 | 4.6E-35 | IPR036576 |
| SMART | SM00774 | WRKY_cls | 399 | 458 | 2.4E-36 | IPR003657 |
| SMART | SM00774 | WRKY_cls | 225 | 283 | 5.5E-36 | IPR003657 |
| ProSiteProfiles | PS50811 | WRKY domain profile. | 394 | 459 | 37.676926 | IPR003657 |
| ProSiteProfiles | PS50811 | WRKY domain profile. | 226 | 284 | 23.881088 | IPR003657 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 25 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 348 | 366 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 461 | 479 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 332 | 376 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 460 | 479 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G13960.1 | WRKY DNA-binding protein 4. Encodes WRKY DNA-binding protein 4 (WRKY4). | 0 |
| RefSeq | XP_039038674.1 | probable WRKY transcription factor 4 [Hibiscus syriacus] | 0 |
| Q9XI90 | Probable WRKY transcription factor 4 OS=Arabidopsis thaliana OX=3702 GN=WRKY4 PE=1 SV=2 | 0 | |
| TrEMBL | A0A6A2X3V9 | Putative WRKY transcription factor 58 OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00112231pilonHSYRG00033 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology