Basic Information
Locus ID:
nbisL1-mrna-10652
Species & Taxonomic ID:
Rhizophora apiculata & 106626
Genome Assembly:
GCA_037832385.1
Description:
Protein STRUBBELIG-RECEPTOR FAMILY 3-like
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr17 | 7285518 | 7291615 | - | nbisL1-mrna-10652 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.26 | 81,495.05 Da | 38.75 | 89.87 | -0.13 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 33 | 70 | 3.3E-4 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 119 | 179 | 5.6E-9 | IPR001611 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 474 | 742 | 1.3E-36 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 449 | 742 | 1.13E-65 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 30 | 238 | 5.35E-32 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 31 | 258 | 3.8E-40 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 546 | 746 | 1.3E-44 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 441 | 545 | 2.7E-28 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 470 | 746 | 32.046738 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 476 | 499 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 328 | 364 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 328 | 352 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 259 | 273 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 259 | 281 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G20850.1 | STRUBBELIG-receptor family 1. | 0 |
| RefSeq | XP_021688641.1 | protein STRUBBELIG-RECEPTOR FAMILY 3-like isoform X1 [Hevea brasiliensis] | 0 |
| Q06BH3 | Protein STRUBBELIG-RECEPTOR FAMILY 1 OS=Arabidopsis thaliana OX=3702 GN=SRF1 PE=1 SV=2 | 0 | |
| TrEMBL | A0A251IU79 | Protein kinase domain-containing protein OS=Manihot esculenta OX=3983 GN=MANES_17G041100 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology