Basic Information
Locus ID:
nbisL1-mrna-10628
Species & Taxonomic ID:
Rhizophora apiculata & 106626
Genome Assembly:
GCA_037832385.1
Description:
serine threonine-protein kinase HT1-like
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr17 | 7635772 | 7638280 | + | nbisL1-mrna-10628 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.38 | 56,453.06 Da | 44.93 | 75.94 | -0.55 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 197 | 446 | 7.32742E-122 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 196 | 446 | 1.6E-64 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 180 | 446 | 3.1E-80 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 275 | 479 | 8.4E-64 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 178 | 274 | 4.7E-20 | - |
| SMART | SM00220 | serkin_6 | 190 | 449 | 4.8E-65 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 190 | 449 | 43.099525 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 314 | 326 | - | IPR008271 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 354 | 364 | 1.8E-19 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 270 | 283 | 1.8E-19 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 417 | 439 | 1.8E-19 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 373 | 395 | 1.8E-19 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 308 | 326 | 1.8E-19 | IPR001245 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 128 | 159 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 43 | 111 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 92 | 111 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 43 | 87 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G58950.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_021672293.1 | serine/threonine-protein kinase HT1-like [Hevea brasiliensis] | 0 |
| Q2MHE4 | Serine/threonine/tyrosine-protein kinase HT1 OS=Arabidopsis thaliana OX=3702 GN=HT1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2P2LRC6 | Uncharacterized protein MANES_17G046400 OS=Rhizophora mucronata OX=61149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology