Basic Information
Locus ID:
nbisL1-mrna-10612
Species & Taxonomic ID:
Rhizophora mangle & 40031
Genome Assembly:
GCA_037832345.1
Description:
Belongs to the UDP-glycosyltransferase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 002113F_pilon | 767864 | 769360 | - | nbisL1-mrna-10612 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.26 | 43,775.69 Da | 38.97 | 84.35 | -0.22 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd03784 | GT1_Gtf-like | 9 | 329 | 1.56449E-31 | IPR002213 |
| SUPERFAMILY | SSF53756 | UDP-Glycosyltransferase/glycogen phosphorylase | 9 | 368 | 8.07E-62 | - |
| Gene3D | G3DSA:3.40.50.2000 | Glycogen Phosphorylase B; | 277 | 367 | 2.1E-15 | - |
| Gene3D | G3DSA:3.40.50.2000 | Glycogen Phosphorylase B; | 1 | 270 | 3.4E-60 | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G15490.3 | UDP-glycosyltransferase 73B4. | 0 |
| RefSeq | XP_052304246.1 | UDP-glycosyltransferase 92A1 isoform X4 [Populus trichocarpa] | 0 |
| Q7Y232 | UDP-glycosyltransferase 73B4 OS=Arabidopsis thaliana OX=3702 GN=UGT73B4 PE=2 SV=1 | 0 | |
| TrEMBL | A0A2P2P572 | Glycosyltransferase OS=Rhizophora mucronata OX=61149 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology