Basic Information
Locus ID:
nbisL1-mrna-10603
Species & Taxonomic ID:
Hibiscus hamabo Siebold & Zucc. & 1841
Description:
Receptor-like cytosolic serine threonine-protein kinase RBK1
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 9127989 | 9128729 | + | nbisL1-mrna-10603 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.58 | 17,401.51 Da | 38.02 | 92.85 | -0.30 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 17 | 69 | 3.8E-6 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 3 | 105 | 5.35E-16 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1 | 116 | 3.5E-20 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 148 | 10.817471 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G10520.1 | ROP binding protein kinases 1. | 0 |
| RefSeq | XP_040935715.1 | receptor-like cytosolic serine/threonine-protein kinase RBK1 [Gossypium hirsutum] | 0 |
| Q8H1D6 | Receptor-like cytosolic serine/threonine-protein kinase RBK1 OS=Arabidopsis thaliana OX=3702 GN=RBK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5B6UJJ3 | Receptor-like cytosolic serine/threonine-protein kinase RBK1 OS=Gossypium australe OX=47621 GN=EPI10_004082 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Asparagaceae | Asparagus officinalis | 4 | AsparagusV1_02.1612.V1.1, AsparagusV1_07.393.V1.1 ... |
| Brassicaceae | Brassica nigra | 1 | BniB04g042410.2N |
| Malvaceae | Hibiscus hamabo Siebold & Zucc. | 1 | nbisL1-mrna-10603 |