Basic Information
Locus ID:
nbisL1-mrna-10546
Species & Taxonomic ID:
Hibiscus hamabo Siebold & Zucc. & 1841
Description:
receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 8607510 | 8608315 | - | nbisL1-mrna-10546 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.75 | 23,802.79 Da | 45.84 | 79.67 | -0.39 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 10 | 201 | 1.05E-21 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 78 | 212 | 3.8E-20 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 2 | 77 | 6.1E-7 | - |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 92 | 104 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G39110.1 | Malectin/receptor-like protein kinase family protein. | 0 |
| RefSeq | XP_022751242.1 | probable receptor-like protein kinase At5g24010 [Durio zibethinus] | 0 |
| Q9T020 | Probable receptor-like protein kinase At4g39110 OS=Arabidopsis thaliana OX=3702 GN=At4g39110 PE=3 SV=1 | 0 | |
| TrEMBL | A0A5D3AAC6 | Protein kinase domain-containing protein OS=Gossypium mustelinum OX=34275 GN=E1A91_A02G173200v1 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 12 | jg26190, jg27419, jg33699, jg39948, jg40172, jg40174 ... |
| Amaranthaceae | Atriplex hortensis | 1 | Ah029071 |
| Amaranthaceae | Suaeda glauca | 4 | Sgl54771, Sgl60073, Sgl72325, Sgl76613 |
| Amaranthaceae | Chenopodium album | 1 | gene:ENSEOMG00000051255 |
| Apiaceae | Apium graveolens | 1 | Ag9G02308 |
| Asparagaceae | Asparagus officinalis | 1 | AsparagusV1_05.568.V1.1 |
| Brassicaceae | Brassica nigra | 1 | BniB05g034230.2N |
| Casuarinaceae | Casuarina glauca | 1 | Cgl08G0418 |
| Malvaceae | Hibiscus hamabo Siebold & Zucc. | 1 | nbisL1-mrna-10546 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00023685 |
| Poaceae | Lolium multiflorum | 2 | gene-QYE76_052093, gene-QYE76_060103 |
| Poaceae | Thinopyrum elongatum | 1 | Tel3E01G131900 |
| Poaceae | Triticum dicoccoides | 1 | gene_TRIDC3BG082610 |
| Rhizophoraceae | Bruguiera sexangula | 4 | evm.TU.30721.1, evm.TU.35434.1, evm.TU.40350.1 ... |
| Rhizophoraceae | Ceriops tagal | 2 | nbisL1-mrna-2331, nbisL1-mrna-2391 |
| Rhizophoraceae | Kandelia candel | 1 | add.evm.TU.utg000011l.454 |
| Rhizophoraceae | Rhizophora apiculata | 2 | nbisL1-mrna-17773, nbisL1-mrna-21411 |
| Salicaceae | Populus euphratica | 2 | populus_peu25128, populus_peu25129 |
| Zosteraceae | Zostera marina | 1 | Zosma06g07960.v3.1 |