Basic Information
Locus ID:
nbisL1-mrna-10492
Species & Taxonomic ID:
Rhizophora apiculata & 106626
Genome Assembly:
GCA_037832385.1
Description:
Belongs to the Ca(2 ) cation antiporter (CaCA) (TC 2.A.19) family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr11 | 8342675 | 8346626 | + | nbisL1-mrna-10492 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.22 | 50,856.60 Da | 40.18 | 113.89 | 0.42 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01699 | Sodium/calcium exchanger protein | 309 | 449 | 6.8E-18 | IPR004837 |
| Pfam | PF01699 | Sodium/calcium exchanger protein | 121 | 276 | 2.0E-20 | IPR004837 |
| Gene3D | G3DSA:1.20.1420.30 | - | 150 | 453 | 5.2E-29 | IPR044880 |
| TIGRFAM | TIGR00846 | caca2: calcium/proton exchanger | 89 | 452 | 9.5E-114 | - |
| TIGRFAM | TIGR00378 | cax: calcium/proton exchanger | 107 | 452 | 2.7E-97 | IPR004798 |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G55730.1 | cation exchanger 5. member of Low affinity calcium antiporter CAX2 family | 0 |
| RefSeq | XP_015578084.1 | vacuolar cation/proton exchanger 2 isoform X1 [Ricinus communis] | 0 |
| Q39254 | Vacuolar cation/proton exchanger 2 OS=Arabidopsis thaliana OX=3702 GN=CAX2 PE=1 SV=2 | 0 | |
| TrEMBL | B9SEZ0 | Vacuolar cation/proton exchanger OS=Ricinus communis OX=3988 GN=RCOM_1211410 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology