Basic Information
Locus ID:
nbisL1-mrna-10417
Species & Taxonomic ID:
Hibiscus hamabo Siebold & Zucc. & 1841
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 7503901 | 7506759 | + | nbisL1-mrna-10417 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.83 | 48,700.45 Da | 49.02 | 83.42 | -0.36 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14136 | STKc_SRPK | 27 | 413 | 8.59835E-176 | - |
| Pfam | PF00069 | Protein kinase domain | 252 | 413 | 1.5E-22 | IPR000719 |
| Pfam | PF00069 | Protein kinase domain | 39 | 178 | 3.2E-20 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 32 | 415 | 6.49E-81 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 92 | 413 | 2.9E-118 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 24 | 123 | 2.9E-118 | - |
| SMART | SM00220 | serkin_6 | 38 | 413 | 1.9E-59 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 38 | 413 | 34.265778 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 165 | 177 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 44 | 67 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 416 | 433 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 412 | 433 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G17530.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_017609263.1 | PREDICTED: SRSF protein kinase 1 [Gossypium arboreum] | 0 |
| Q45FA5 | Serine/threonine-protein kinase SRPK OS=Physarum polycephalum OX=5791 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0B0NCP9 | SRSF protein kinase 1 OS=Gossypium arboreum OX=29729 GN=LOC108455175 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology