Basic Information
Locus ID:
nbisL1-mrna-10412
Species & Taxonomic ID:
Hibiscus hamabo Siebold & Zucc. & 1841
Description:
serine threonine-protein kinase endoribonuclease
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 7470166 | 7470933 | + | nbisL1-mrna-10412 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.30 | 28,852.19 Da | 42.61 | 107.37 | -0.06 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 114 | 196 | 4.25E-11 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 99 | 181 | 4.3E-27 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 55 | 77 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G17520.1 | Endoribonuclease/protein kinase IRE1-like. Encodes a endoribonuclease/protein kinase IRE1-like protein that is predicted to form a type I transmembrane protein structure and contain kinase/endoribonuclease domains at their C-terminal halves. The transcript levels for several ER-stress responsive genes, including six protein disulfide isomerases (PDIs), BiP2, and AtbZIP60 are not affected in ire1-2 null mutants. | 0 |
| RefSeq | XP_040945426.1 | serine/threonine-protein kinase/endoribonuclease IRE1a isoform X2 [Gossypium hirsutum] | 0 |
| Q9C5S2 | Serine/threonine-protein kinase/endoribonuclease IRE1a OS=Arabidopsis thaliana OX=3702 GN=IRE1A PE=1 SV=1 | 0 | |
| TrEMBL | A0A6A3BU44 | Glutamate receptor 3.6 OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00109919pilonHSYRG00036 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Casuarinaceae | Casuarina equisetifolia | 2 | Ceq01G0614, Ceq01G0618 |
| Malvaceae | Hibiscus hamabo Siebold & Zucc. | 1 | nbisL1-mrna-10412 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-11638 |
| Rhizophoraceae | Kandelia candel | 1 | add.evm.TU.utg000011l.560 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-23115 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-23703 |