Basic Information
Locus ID:
nbisL1-mrna-10404
Species & Taxonomic ID:
Rhizophora mangle & 40031
Genome Assembly:
GCA_037832345.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 002102F_pilon | 1580875 | 1590185 | + | nbisL1-mrna-10404 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.24 | 48,651.57 Da | 44.32 | 84.85 | -0.39 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 139 | 197 | 1.0E-7 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 3 | 226 | 1.36E-40 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1 | 246 | 5.9E-50 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 161 | 185 | 4.3 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 114 | 138 | 140.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 67 | 91 | 150.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 43 | 66 | 130.0 | IPR003591 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 161 | 174 | 4.4E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 117 | 130 | 4.4E-5 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 390 | 439 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 403 | 427 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G06840.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_011041757.1 | PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g06840 [Populus euphratica] | 0 |
| C0LGD7 | Probable LRR receptor-like serine/threonine-protein kinase At1g06840 OS=Arabidopsis thaliana OX=3702 GN=At1g06840 PE=1 SV=2 | 0 | |
| TrEMBL | A0A2P2M570 | - | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology