Basic Information
Locus ID:
nbisL1-mrna-10280
Species & Taxonomic ID:
Hibiscus hamabo Siebold & Zucc. & 1841
Description:
WRKY transcription factor
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 6530169 | 6532851 | + | nbisL1-mrna-10280 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.43 | 42,488.70 Da | 56.74 | 59.72 | -0.82 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03106 | WRKY DNA -binding domain | 298 | 355 | 6.2E-25 | IPR003657 |
| SUPERFAMILY | SSF118290 | WRKY DNA-binding domain | 289 | 357 | 1.11E-28 | IPR036576 |
| Gene3D | G3DSA:2.20.25.80 | WRKY domain | 282 | 358 | 1.2E-35 | IPR036576 |
| SMART | SM00774 | WRKY_cls | 297 | 356 | 1.7E-37 | IPR003657 |
| ProSiteProfiles | PS50811 | WRKY domain profile. | 292 | 357 | 38.388523 | IPR003657 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 357 | 374 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 175 | 201 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 351 | 374 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 246 | 267 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 231 | 269 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G13960.1 | WRKY DNA-binding protein 4. Encodes WRKY DNA-binding protein 4 (WRKY4). | 0 |
| RefSeq | XP_017975383.1 | PREDICTED: probable WRKY transcription factor 3 [Theobroma cacao] | 0 |
| Q9XI90 | Probable WRKY transcription factor 4 OS=Arabidopsis thaliana OX=3702 GN=WRKY4 PE=1 SV=2 | 0 | |
| TrEMBL | A0A6A2ZCY6 | Putative WRKY transcription factor 58 OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00110940pilonHSYRG00250 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology