Basic Information
Locus ID:
nbisL1-mrna-1028
Species & Taxonomic ID:
Ceriops zippeliana & 413951
Genome Assembly:
GCA_037897445.1
Description:
Serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 000003F_pilon | 6218513 | 6224608 | + | nbisL1-mrna-1028 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.27 | 85,985.90 Da | 51.49 | 70.28 | -0.59 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 507 | 753 | 6.07687E-131 | - |
| CDD | cd00130 | PAS | 136 | 238 | 3.49117E-12 | IPR000014 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 501 | 753 | 5.3E-70 | IPR001245 |
| Pfam | PF00989 | PAS fold | 128 | 235 | 4.9E-10 | IPR013767 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 482 | 752 | 9.44E-86 | IPR011009 |
| SUPERFAMILY | SSF55785 | PYP-like sensor domain (PAS domain) | 127 | 238 | 3.66E-18 | IPR035965 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 579 | 778 | 1.2E-65 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 494 | 578 | 4.8E-31 | - |
| Gene3D | G3DSA:3.30.450.20 | PAS domain | 137 | 244 | 1.2E-21 | - |
| SMART | SM00091 | pas_2 | 127 | 193 | 1.4E-8 | IPR000014 |
| SMART | SM00220 | serkin_6 | 501 | 760 | 1.5E-58 | IPR000719 |
| TIGRFAM | TIGR00229 | sensory_box: PAS domain S-box protein | 127 | 236 | 5.4E-14 | IPR000014 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 501 | 761 | 43.891029 | IPR000719 |
| ProSiteProfiles | PS50112 | PAS repeat profile. | 125 | 196 | 16.155266 | IPR000014 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 620 | 632 | - | IPR008271 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 661 | 671 | 3.0E-12 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 724 | 746 | 3.0E-12 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 680 | 702 | 3.0E-12 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 575 | 588 | 3.0E-12 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 614 | 632 | 3.0E-12 | IPR001245 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 401 | 464 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 17 | 46 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 17 | 66 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 419 | 464 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 299 | 321 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 86 | 114 | - | - |
| Coils | Coil | Coil | 6 | 33 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G49470.3 | PAS domain-containing protein tyrosine kinase family protein. | 0 |
| RefSeq | XP_012084067.1 | interferon-induced, double-stranded RNA-activated protein kinase isoform X2 [Jatropha curcas] | 0 |
| Q9FPR3 | Serine/threonine-protein kinase EDR1 OS=Arabidopsis thaliana OX=3702 GN=EDR1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2P2L7M7 | Serine/threonine-protein kinase CTR1 OS=Rhizophora mucronata OX=61149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology