Basic Information
Locus ID:
nbisL1-mrna-10277
Species & Taxonomic ID:
Ceriops zippeliana & 413951
Genome Assembly:
GCA_037897445.1
Description:
Belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 000133F_pilon | 1589879 | 1595509 | - | nbisL1-mrna-10277 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.87 | 39,030.31 Da | 43.26 | 75.12 | -0.56 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 44 | 132 | 3.7E-12 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 9 | 204 | 1.29E-50 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1 | 135 | 1.3E-49 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 136 | 244 | 2.0E-19 | - |
| SMART | SM00220 | serkin_6 | 14 | 216 | 1.7E-6 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 275 | 12.329808 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 92 | 104 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 261 | 331 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 261 | 294 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 312 | 331 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G28540.1 | casein kinase I-like 6. | 0 |
| RefSeq | XP_021678303.1 | casein kinase 1-like protein 7 isoform X2 [Hevea brasiliensis] | 0 |
| Q8LPJ1 | Casein kinase 1-like protein 6 OS=Arabidopsis thaliana OX=3702 GN=CKL6 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2P2M8Z1 | Protein kinase domain-containing protein OS=Rhizophora mucronata OX=61149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_5_RagTag.1116 |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-13843 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-10277 |