Basic Information
Locus ID:
nbisL1-mrna-10269
Species & Taxonomic ID:
Carallia pectinifolia & 98586
Genome Assembly:
GCA_037832335.1
Description:
protein STRUBBELIG-RECEPTOR FAMILY 5-like
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr04 | 21344874 | 21350583 | - | nbisL1-mrna-10269 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.70 | 72,860.03 Da | 47.15 | 84.21 | -0.34 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 92 | 132 | 4.2E-7 | IPR001611 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 370 | 634 | 3.4E-42 | IPR001245 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 30 | 70 | 2.3E-7 | IPR013210 |
| SUPERFAMILY | SSF52058 | L domain-like | 30 | 192 | 3.69E-26 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 348 | 634 | 2.73E-71 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 444 | 658 | 7.0E-53 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 328 | 443 | 1.3E-25 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 28 | 206 | 1.9E-36 | IPR032675 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 366 | 637 | 36.343475 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 196 | 226 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 305 | 320 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 296 | 320 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G78980.1 | STRUBBELIG-receptor family 5. | 0 |
| RefSeq | XP_021681657.1 | protein STRUBBELIG-RECEPTOR FAMILY 5 [Hevea brasiliensis] | 0 |
| Q6R2K1 | Protein STRUBBELIG-RECEPTOR FAMILY 5 OS=Arabidopsis thaliana OX=3702 GN=SRF5 PE=1 SV=1 | 0 | |
| TrEMBL | A0A067JYE7 | Protein kinase domain-containing protein OS=Jatropha curcas OX=180498 GN=JCGZ_22565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology