halophFGD

Basic Information

Locus ID: nbisL1-mrna-1026

Species & Taxonomic ID: Hibiscus hamabo Siebold & Zucc. & 1841

Genome Assembly:

Description: Mitogen-activated protein kinase kinase kinase

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr1	8319497	8319700	-	nbisL1-mrna-1026

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
5.12	7,522.58 Da	51.81	75.82	-0.06

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
SUPERFAMILY	SSF56112	Protein kinase-like (PK-like)	3	50	5.42E-12	IPR011009
Gene3D	G3DSA:1.10.510.10	Transferase(Phosphotransferase) domain 1	1	65	2.2E-11	-
ProSiteProfiles	PS50011	Protein kinase domain profile.	1	67	10.845738	IPR000719

Gene Ontology

Biological Process:

GO:0006468 (protein phosphorylation)

Molecular Function:

KEGG Pathway

KO Term:

K20716 (mitogen-activated protein kinase kinase kinase 17/18)

Pathway:

ko04016 (MAPK signaling pathway - plant) map04016 (MAPK signaling pathway - plant)

Best hit

Source	Best Hit ID	Description
TAIR	AT5G55090.1	mitogen-activated protein kinase kinase kinase 15. member of MEKK subfamily
RefSeq	XP_039052893.1	mitogen-activated protein kinase kinase kinase 18-like [Hibiscus syriacus]
Swiss-Prot	O80888	Mitogen-activated protein kinase kinase kinase 17 OS=Arabidopsis thaliana OX=3702 GN=MAPKKK17 PE=1 SV=1
TrEMBL	A0A438EDM3	Mitogen-activated protein kinase kinase kinase 18 OS=Vitis vinifera OX=29760 GN=MAPKKK18_5 PE=3 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

Orthology

Family	Species	Count	Orthologous Genes
Malvaceae	Hibiscus hamabo Siebold & Zucc.	1	nbisL1-mrna-1026
Poaceae	Echinochloa crus-galli	1	BH06.1345
Poaceae	Sporobolus alterniflorus	1	Chr16G014140