Basic Information
Locus ID:
nbisL1-mrna-10233
Species & Taxonomic ID:
Rhizophora apiculata & 106626
Genome Assembly:
GCA_037832385.1
Description:
phosphatidylinositol 3- and 4-kinase family protein ubiquitin family protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr11 | 6172474 | 6174370 | - | nbisL1-mrna-10233 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.57 | 65,956.65 Da | 35.57 | 87.56 | -0.30 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd17039 | Ubl_ubiquitin_like | 112 | 182 | 2.94296E-5 | - |
| Pfam | PF00240 | Ubiquitin family | 45 | 106 | 1.7E-13 | IPR000626 |
| Pfam | PF00240 | Ubiquitin family | 112 | 185 | 2.4E-7 | IPR000626 |
| Pfam | PF00454 | Phosphatidylinositol 3- and 4-kinase | 283 | 532 | 1.4E-52 | IPR000403 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 36 | 107 | 1.54E-14 | IPR029071 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 108 | 186 | 8.06E-10 | IPR029071 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 419 | 584 | 3.57E-10 | IPR011009 |
| Gene3D | G3DSA:3.10.20.90 | - | 36 | 108 | 1.9E-12 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 111 | 199 | 6.9E-9 | - |
| SMART | SM00213 | ubq_7 | 110 | 184 | 0.11 | IPR000626 |
| SMART | SM00213 | ubq_7 | 34 | 105 | 8.4E-4 | IPR000626 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 112 | 169 | 9.199316 | IPR000626 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 32 | 105 | 13.20599 | IPR000626 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G46500.1 | phosphoinositide 4-kinase gamma 4. Phosphoinositide kinase which undergo autophosphorylation and phosphorylate serine/threonine residues of protein substrates. Contains phosphoinositide 3/4-kinase and ubiquitin-like domains. Phosphorylates PUFD1 and RPN10 in vitro. | 0 |
| RefSeq | XP_002320202.4 | phosphatidylinositol 4-kinase gamma 4 [Populus trichocarpa] | 0 |
| Q9ZPY9 | Phosphatidylinositol 4-kinase gamma 4 OS=Arabidopsis thaliana OX=3702 GN=PI4KG4 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2P2JFP2 | 1-phosphatidylinositol 4-kinase OS=Rhizophora mucronata OX=61149 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology