Basic Information
Locus ID:
nbisL1-mrna-10211
Species & Taxonomic ID:
Hibiscus hamabo Siebold & Zucc. & 1841
Description:
receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 5982960 | 5986331 | + | nbisL1-mrna-10211 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.90 | 79,498.46 Da | 50.71 | 92.16 | -0.30 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00293 | USP_Like | 18 | 142 | 7.30613E-11 | - |
| Pfam | PF00582 | Universal stress protein family | 18 | 141 | 1.9E-9 | IPR006016 |
| Pfam | PF00069 | Protein kinase domain | 377 | 583 | 4.2E-45 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 355 | 654 | 2.6E-74 | IPR011009 |
| SUPERFAMILY | SSF52402 | Adenine nucleotide alpha hydrolases-like | 18 | 132 | 1.36E-7 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 344 | 447 | 2.5E-27 | - |
| Gene3D | G3DSA:3.40.50.620 | HUPs | 17 | 149 | 9.5E-7 | IPR014729 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 448 | 663 | 4.6E-59 | - |
| SMART | SM00220 | serkin_6 | 373 | 632 | 3.0E-33 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 373 | 651 | 37.67207 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 379 | 401 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 493 | 505 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G63940.1 | Protein kinase protein with adenine nucleotide alpha hydrolases-like domain. | 0 |
| RefSeq | XP_038997877.1 | probable receptor-like serine/threonine-protein kinase At5g57670 isoform X1 [Hibiscus syriacus] | 0 |
| B5X4Z9 | Protein kinase STUNTED OS=Arabidopsis thaliana OX=3702 GN=STU PE=2 SV=1 | 0 | |
| TrEMBL | A0A6A3ASQ3 | Kinase protein with adenine nucleotide alpha hydrolases-like domain, putative isoform 5 OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00110388pilonHSYRG00300 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology