Basic Information
Locus ID:
nbisL1-mrna-10179
Species & Taxonomic ID:
Ceriops zippeliana & 413951
Genome Assembly:
GCA_037897445.1
Description:
Lymphoid organ expressed yellow head virus receptor protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 000011F_pilon | 5305721 | 5310254 | + | nbisL1-mrna-10179 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.53 | 53,672.24 Da | 53.16 | 59.22 | -0.82 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF06886 | Targeting protein for Xklp2 (TPX2) domain | 269 | 352 | 2.4E-23 | IPR027329 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 42 | 56 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 412 | 426 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 465 | 480 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 253 | 271 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 30 | 200 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 213 | 274 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 106 | 130 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 155 | 200 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 131 | 154 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 325 | 382 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 71 | 90 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 394 | 480 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 356 | 382 | - | - |
| Coils | Coil | Coil | 284 | 314 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G35880.1 | TPX2 (targeting protein for Xklp2) protein family. | 0 |
| RefSeq | XP_021657084.1 | protein WVD2-like 4 isoform X6 [Hevea brasiliensis] | 0 |
| Q9SJ62 | Protein WVD2-like 4 OS=Arabidopsis thaliana OX=3702 GN=WDL4 PE=1 SV=2 | 0 | |
| TrEMBL | A0A2P2LLE3 | Uncharacterized protein LOC105138210 OS=Rhizophora mucronata OX=61149 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology