Basic Information
Locus ID:
nbisL1-mrna-10168
Species & Taxonomic ID:
Rhizophora mangle & 40031
Genome Assembly:
GCA_037832345.1
Description:
DnaJ domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 000355F_pilon | 3216460 | 3217455 | + | nbisL1-mrna-10168 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.03 | 37,537.29 Da | 51.03 | 72.87 | -0.54 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06257 | DnaJ | 68 | 121 | 5.68093E-20 | IPR001623 |
| CDD | cd15489 | PHD_SF | 179 | 227 | 0.00362213 | - |
| Pfam | PF00226 | DnaJ domain | 68 | 129 | 3.3E-20 | IPR001623 |
| SUPERFAMILY | SSF46565 | Chaperone J-domain | 61 | 131 | 3.79E-20 | IPR036869 |
| Gene3D | G3DSA:1.10.287.110 | DnaJ domain | 55 | 139 | 4.8E-21 | IPR036869 |
| SMART | SM00271 | dnaj_3 | 67 | 124 | 2.0E-21 | IPR001623 |
| ProSiteProfiles | PS50076 | dnaJ domain profile. | 68 | 132 | 15.914788 | IPR001623 |
| ProSitePatterns | PS00636 | Nt-dnaJ domain signature. | 109 | 128 | - | IPR018253 |
| PRINTS | PR00625 | DnaJ domain signature | 104 | 124 | 9.2E-11 | IPR001623 |
| PRINTS | PR00625 | DnaJ domain signature | 88 | 103 | 9.2E-11 | IPR001623 |
| PRINTS | PR00625 | DnaJ domain signature | 70 | 88 | 9.2E-11 | IPR001623 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 287 | 314 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G01710.1 | Chaperone DnaJ-domain superfamily protein. | 0 |
| RefSeq | XP_021601873.2 | uncharacterized protein LOC110607111 [Manihot esculenta] | 0 |
| P48353 | Protein HLJ1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=HLJ1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2P2JYL0 | Uncharacterized protein MANES_02G145200 OS=Rhizophora mucronata OX=61149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology