Basic Information
Locus ID:
nbisL1-mrna-10164
Species & Taxonomic ID:
Hibiscus hamabo Siebold & Zucc. & 1841
Description:
Oxidation resistance protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 5499717 | 5503156 | - | nbisL1-mrna-10164 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.61 | 40,982.33 Da | 43.41 | 75.25 | -0.57 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07534 | TLD | 209 | 345 | 1.6E-31 | IPR006571 |
| SMART | SM00584 | 109ultra | 183 | 346 | 5.3E-32 | IPR006571 |
| ProSiteProfiles | PS51886 | TLDc domain profile. | 184 | 346 | 28.356163 | IPR006571 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 18 | 66 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 132 | 151 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 50 | 65 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 100 | 117 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 23 | 49 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 84 | 122 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G39870.1 | TLD-domain containing nucleolar protein. | 0 |
| RefSeq | XP_038999906.1 | oxidation resistance protein 1-like [Hibiscus syriacus] | 0 |
| Q9VIH7 | GTPase-activating protein skywalker OS=Drosophila melanogaster OX=7227 GN=sky PE=1 SV=2 | 0 | |
| TrEMBL | A0A6A2YD90 | TLD-domain containing nucleolar protein isoform 2 OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00111584pilonHSYRG00208 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology