Basic Information
Locus ID:
nbisL1-mrna-10152
Species & Taxonomic ID:
Rhizophora mangle & 40031
Genome Assembly:
GCA_037832345.1
Description:
Serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 000355F_pilon | 3108346 | 3121514 | + | nbisL1-mrna-10152 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.12 | 101,949.34 Da | 48.43 | 84.35 | -0.39 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 643 | 891 | 6.77991E-127 | - |
| Pfam | PF14381 | Ethylene-responsive protein kinase Le-CTR1 | 276 | 484 | 8.1E-75 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 637 | 891 | 1.9E-63 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 614 | 890 | 3.91E-81 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 630 | 714 | 4.1E-35 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 716 | 902 | 2.6E-59 | - |
| SMART | SM00220 | serkin_6 | 637 | 895 | 1.9E-55 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 637 | 895 | 42.929916 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 643 | 664 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 758 | 770 | - | IPR008271 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 752 | 770 | 6.1E-11 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 818 | 840 | 6.1E-11 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 711 | 724 | 6.1E-11 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 862 | 884 | 6.1E-11 | IPR001245 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G24480.2 | - | 0 |
| RefSeq | XP_021613385.1 | - | 0 |
| Q05609 | Serine/threonine-protein kinase CTR1 OS=Arabidopsis thaliana OX=3702 GN=CTR1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2C9VZ24 | - | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology