Basic Information
Locus ID:
nbisL1-mrna-10056
Species & Taxonomic ID:
Ceriops zippeliana & 413951
Genome Assembly:
GCA_037897445.1
Description:
Myb/SANT-like DNA-binding domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 000011F_pilon | 4380120 | 4381619 | + | nbisL1-mrna-10056 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.96 | 57,456.93 Da | 57.16 | 55.69 | -1.20 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13837 | Myb/SANT-like DNA-binding domain | 118 | 244 | 5.6E-21 | IPR044822 |
| Gene3D | G3DSA:1.10.10.60 | - | 121 | 195 | 8.1E-13 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 478 | 499 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 81 | 95 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 81 | 115 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 312 | 378 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 267 | 291 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 477 | 499 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 340 | 373 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 316 | 339 | - | - |
| Coils | Coil | Coil | 438 | 467 | - | - |
| Coils | Coil | Coil | 410 | 430 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G10040.1 | sequence-specific DNA binding transcription factors. | 0 |
| RefSeq | XP_021686057.1 | uncharacterized protein LOC110668938 [Hevea brasiliensis] | 0 |
| TrEMBL | A0A6A6KLH4 | Myb_DNA-bind_4 domain-containing protein OS=Hevea brasiliensis OX=3981 GN=GH714_038683 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology