Basic Information
Locus ID:
nbis-gene-9933
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
PhoX homologous domain, present in p47phox and p40phox.
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00008.1 | 1877134 | 1888690 | + | nbis-gene-9933 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.16 | 86,637.25 Da | 56.35 | 77.19 | -0.74 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14279 | CUE | 540 | 576 | 1.11853E-8 | - |
| Pfam | PF00787 | PX domain | 41 | 117 | 1.1E-14 | IPR001683 |
| Pfam | PF02845 | CUE domain | 540 | 579 | 6.3E-6 | IPR003892 |
| SUPERFAMILY | SSF46934 | UBA-like | 537 | 584 | 3.32E-8 | IPR009060 |
| SUPERFAMILY | SSF64268 | PX domain | 15 | 119 | 2.62E-22 | IPR036871 |
| Gene3D | G3DSA:1.10.8.10 | - | 535 | 586 | 1.4E-5 | - |
| Gene3D | G3DSA:3.30.1520.10 | - | 8 | 137 | 4.8E-24 | IPR036871 |
| SMART | SM00312 | PX_2 | 7 | 119 | 8.8E-20 | IPR001683 |
| ProSiteProfiles | PS51140 | CUE domain profile. | 538 | 581 | 14.257477 | IPR003892 |
| ProSiteProfiles | PS50195 | PX domain profile. | 4 | 123 | 16.047472 | IPR001683 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 202 | 224 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 392 | 475 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 432 | 446 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 394 | 423 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 512 | 535 | - | - |
| Coils | Coil | Coil | 562 | 582 | - | - |
| Coils | Coil | Coil | 265 | 285 | - | - |
| Coils | Coil | Coil | 648 | 668 | - | - |
| Coils | Coil | Coil | 723 | 743 | - | - |
| Coils | Coil | Coil | 184 | 218 | - | - |
| Coils | Coil | Coil | 148 | 175 | - | - |
| Coils | Coil | Coil | 226 | 253 | - | - |
Gene Ontology
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G32440.1 | Ubiquitin system component Cue protein. | 0 |
| RefSeq | XP_025810785.1 | PX domain-containing protein EREL1 [Panicum hallii] | 0 |
| Q9LSB9 | PX domain-containing protein EREX OS=Arabidopsis thaliana OX=3702 GN=EREX PE=1 SV=1 | 0 | |
| TrEMBL | A0A6G1CVB8 | PX domain-containing protein OS=Oryza meyeriana var. granulata OX=110450 GN=E2562_031556 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology