Basic Information
Locus ID:
nbis-gene-9678
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
positive regulation of chaperone-mediated autophagy
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00008.1 | 768405 | 772057 | + | nbis-gene-9678 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.69 | 59,494.43 Da | 53.46 | 89.06 | -0.27 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 184 | 493 | 7.0E-40 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 182 | 508 | 1.52E-53 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 294 | 504 | 1.4E-37 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 180 | 293 | 3.9E-13 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 184 | 493 | 34.817001 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 190 | 213 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 214 | 234 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G67580.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_044968899.1 | putative cyclin-dependent kinase F-2 [Hordeum vulgare subsp. vulgare] | 0 |
| Q2QSL4 | Putative cyclin-dependent kinase F-2 OS=Oryza sativa subsp. japonica OX=39947 GN=CDKF-2 PE=3 SV=1 | 0 | |
| TrEMBL | A0A5J9TBS8 | Protein kinase domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_42058 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_4BG0329520, gene-QOZ80_6BG0502780 |
| Poaceae | Sporobolus alterniflorus | 3 | Chr02G032360, Chr05G001370, Chr18G010500 |
| Poaceae | Zoysia japonica | 4 | nbis-gene-40642, nbis-gene-55776, nbis-gene-59079 ... |
| Poaceae | Zoysia macrostachya | 2 | Zma_g31049, Zma_g33307 |