Basic Information
Locus ID:
nbis-gene-9501
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
U-box domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00008.1 | 38722 | 42519 | + | nbis-gene-9501 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.18 | 15,527.77 Da | 32.34 | 88.66 | -0.15 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 1 | 96 | 1.51E-9 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1 | 107 | 3.3E-15 | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G51270.1 | U-box domain-containing protein kinase family protein. | 0 |
| RefSeq | XP_025810496.1 | U-box domain-containing protein 33-like [Panicum hallii] | 0 |
| Q5WA76 | U-box domain-containing protein 70 OS=Oryza sativa subsp. japonica OX=39947 GN=PUB70 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2T8JB97 | Protein kinase domain-containing protein OS=Panicum hallii OX=206008 GN=PAHAL_4G000500 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 3 | AH06.3077, BH06.2876, CH06.990 |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_6AG0551760, gene-QOZ80_6BG0505340 |
| Poaceae | Sporobolus alterniflorus | 1 | Chr02G033750 |
| Poaceae | Zoysia japonica | 1 | nbis-gene-9501 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g31192 |