HalophFGD

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Basic Information
Locus ID: nbis-gene-9264
Species & Taxonomic ID: Zoysia japonica & 309978
Genome Assembly: GCA_040438285.1
Description: BEST Arabidopsis thaliana protein match is
Maps and Mapping Data
Chromosome Start End Strand ID
Zjn_sc00007.1 4453327 4455181 + nbis-gene-9264
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
10.63 38,664.30 Da 58.38 68.27 -0.53
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
MobiDBLite mobidb-lite consensus disorder prediction 22 42 - -
MobiDBLite mobidb-lite consensus disorder prediction 295 345 - -
MobiDBLite mobidb-lite consensus disorder prediction 295 324 - -
MobiDBLite mobidb-lite consensus disorder prediction 80 110 - -
MobiDBLite mobidb-lite consensus disorder prediction 89 108 - -
Best hit
Source Best Hit ID Description E-value
RefSeq XP_025793831.1 uncharacterized protein LOC112874613 [Panicum hallii] 0
TrEMBL A0A5J9UZ73 GATA-type domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_20485 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology
Family Species Count Orthologous Genes
Acanthaceae Avicennia marina 5 jg11019, jg1792, jg1793, jg29205, jg29705
Aizoaceae Mesembryanthemum crystallinum 2 gene_1316, gene_1473
Amaranthaceae Atriplex hortensis 2 Ah023262, Ah023748
Amaranthaceae Beta vulgaris 1 BVRB_1g008150
Amaranthaceae Salicornia bigelovii 4 Sbi_jg29222, Sbi_jg3459, Sbi_jg4151, Sbi_jg49656
Amaranthaceae Salicornia europaea 2 Seu_jg5604, Seu_jg6505
Amaranthaceae Suaeda aralocaspica 2 GOSA_00000212, GOSA_00001008
Amaranthaceae Suaeda glauca 3 Sgl10547, Sgl11356, Sgl16741
Amaranthaceae Chenopodium album 6 gene:ENSEOMG00000013018, gene:ENSEOMG00000014117 ...
gene:ENSEOMG00000034726, gene:ENSEOMG00000035407, gene:ENSEOMG00000046445, gene:ENSEOMG00000048540
Amaranthaceae Chenopodium quinoa 4 CQ.Regalona.r1.1AG0007050, CQ.Regalona.r1.1AG0010950 ...
CQ.Regalona.r1.1BG0014920, CQ.Regalona.r1.2BG0022750
Anacardiaceae Pistacia vera 2 pistato.v30002300, pistato.v30041640
Apiaceae Apium graveolens 2 Ag1G00103, Ag5G01159
Arecaceae Cocos nucifera 6 COCNU_03G007340, COCNU_06G018220, COCNU_07G005590 ...
COCNU_07G005600, COCNU_10G003820, COCNU_13G003700
Arecaceae Phoenix dactylifera 3 gene-LOC103711006, gene-LOC103716548, gene-LOC103723726
Asparagaceae Asparagus officinalis 2 AsparagusV1_01.3571.V1.1, AsparagusV1_08.2361.V1.1
Asteraceae Flaveria trinervia 5 Ftri15G24730, Ftri3G28602, Ftri5G26837, Ftri7G29390 ...
Ftri9G26886
Brassicaceae Arabidopsis thaliana 2 AT1G02070.1, AT3G60520.1
Brassicaceae Eutrema salsugineum 2 Thhalv10006310m.g.v1.0, Thhalv10009084m.g.v1.0
Brassicaceae Schrenkiella parvula 3 Sp1g00230.v2.2, Sp2g24365.v2.2, Sp5g02700.v2.2
Brassicaceae Brassica nigra 3 BniB02g000880.2N, BniB06g053570.2N, BniB08g074900.2N
Casuarinaceae Casuarina equisetifolia 2 Ceq03G1230, Ceq05G1108
Casuarinaceae Casuarina glauca 1 Cgl03G1335
Cymodoceaceae Cymodocea nodosa 2 gene.Cymno02g08340, gene.Cymno03g07020
Hydrocharitaceae Thalassia testudinum 3 gene.Thate02g04800, gene.Thate05g27060, gene.Thate09g03130
Malvaceae Hibiscus hamabo Siebold & Zucc. 2 nbisL1-mrna-2081, nbisL1-mrna-6086
Nitrariaceae Nitraria sibirica 2 evm.TU.LG04.126, evm.TU.LG06.1559
Plumbaginaceae Limonium bicolor 3 Lb5G28843, Lb6G30192, Lb6G31412
Poaceae Echinochloa crus-galli 16 AH01.4721, AH07.2287, AH07.2874, AH09.1171, AH09.1836 ...
BH07.2692, BH07.3933, BH07.3936, BH09.1272, BH09.2009, CH01.5297, CH07.2176, CH07.2763, CH09.1383, CH09.2159, Contig181.144
Poaceae Eleusine coracana subsp. coracana 10 gene-QOZ80_2AG0134780, gene-QOZ80_2AG0139790 ...
gene-QOZ80_2BG0190270, gene-QOZ80_2BG0195450, gene-QOZ80_3AG0236570, gene-QOZ80_3BG0291470, gene-QOZ80_4AG0308230, gene-QOZ80_4AG0315770, gene-QOZ80_4BG0339240, gene-QOZ80_4BG0346760
Poaceae Hordeum vulgare 3 HORVU.MOREX.r3.2HG0172080.1, HORVU.MOREX.r3.2HG0189600.1 ...
HORVU.MOREX.r3.6HG0600930.1
Poaceae Lolium multiflorum 1 gene-QYE76_018209
Poaceae Oryza coarctata 9 Oco03G017220, Oco04G013180, Oco04G017970, Oco05G004890 ...
Oco06G005010, Oco07G007150, Oco07G012430, Oco08G007060, Oco08G012160
Poaceae Oryza sativa 5 LOC_Os02g36000.1, LOC_Os02g44090.1, LOC_Os03g08840.1 ...
LOC_Os04g37700.1, LOC_Os04g46600.1
Poaceae Paspalum vaginatum 5 gene-BS78_01G455400, gene-BS78_04G170400 ...
gene-BS78_04G218800, gene-BS78_06G114800, gene-BS78_06G181500
Poaceae Puccinellia tenuiflora 6 Pt_Chr0101404, Pt_Chr0107709, Pt_Chr0301769, Pt_Chr0301780 ...
Pt_Chr0302557, Pt_Chr0504742
Poaceae Sporobolus alterniflorus 14 Chr04G002490, Chr06G005830, Chr07G008750, Chr09G013710 ...
Chr09G024290, Chr12G013570, Chr13G009560, Chr15G007450, Chr23G011870, Chr25G005890, Chr25G007840, Chr26G007650, Chr30G005710, Chr30G007740
Poaceae Thinopyrum elongatum 4 Tel2E01G558700, Tel2E01G705500, Tel4E01G505200 ...
Tel6E01G468100
Poaceae Triticum dicoccoides 7 gene_TRIDC2AG046170, gene_TRIDC2AG059720 ...
gene_TRIDC2BG049120, gene_TRIDC4AG000180, gene_TRIDC4BG051640, gene_TRIDC6AG038530, gene_TRIDC6BG045430
Poaceae Triticum aestivum 12 TraesCS2A02G317800.1, TraesCS2A02G413800.1 ...
TraesCS2B02G335800.1, TraesCS2B02G432600.1, TraesCS2D02G315500.1, TraesCS2D02G410800.1, TraesCS4A02G001900.1, TraesCS4B02G303200.1, TraesCS4D02G301700.1, TraesCS6A02G250100.1, TraesCS6B02G275300.1, TraesCS6D02G231900.1
Poaceae Zea mays 10 Zm00001eb006590_P001, Zm00001eb074720_P001 ...
Zm00001eb081390_P001, Zm00001eb186590_P001, Zm00001eb244610_P001, Zm00001eb244620_P001, Zm00001eb249520_P001, Zm00001eb401520_P001, Zm00001eb423710_P001, Zm00001eb429690_P001
Poaceae Zoysia japonica 7 nbis-gene-22366, nbis-gene-37281, nbis-gene-37717 ...
nbis-gene-4267, nbis-gene-58667, nbis-gene-7539, nbis-gene-9264
Poaceae Zoysia macrostachya 7 Zma_g13736, Zma_g14051, Zma_g16813, Zma_g19795, Zma_g20192 ...
Zma_g21367, Zma_g4270
Portulacaceae Portulaca oleracea 4 evm.TU.LG04.1870, evm.TU.LG06.486, evm.TU.LG19.735 ...
evm.TU.LG24.725
Posidoniaceae Posidonia oceanica 3 gene.Posoc02g19030, gene.Posoc04g17510, gene.Posoc07g04560
Rhizophoraceae Bruguiera sexangula 3 evm.TU.Scaffold_7_RagTag.214, evm.TU.Scaffold_7_RagTag.940 ...
evm.TU.Scaffold_8_RagTag.802
Rhizophoraceae Carallia pectinifolia 5 nbisL1-mrna-18950, nbisL1-mrna-19504, nbisL1-mrna-8323 ...
nbisL1-mrna-8401, nbisL1-mrna-9438
Rhizophoraceae Ceriops tagal 2 nbisL1-mrna-12704, nbisL1-mrna-13797
Rhizophoraceae Ceriops zippeliana 3 nbisL1-mrna-15160, nbisL1-mrna-6773, nbisL1-mrna-7075
Rhizophoraceae Kandelia candel 4 evm.TU.utg000002l.720, evm.TU.utg000018l.112 ...
evm.TU.utg000018l.484, evm.TU.utg000028l.123
Rhizophoraceae Kandelia obovata 3 Maker00002777, Maker00002791, Maker00010565
Rhizophoraceae Rhizophora apiculata 4 nbisL1-mrna-11513, nbisL1-mrna-13044, nbisL1-mrna-20499 ...
nbisL1-mrna-8085
Rhizophoraceae Rhizophora mangle 3 nbisL1-mrna-10185, nbisL1-mrna-22757, nbisL1-mrna-9767
Salicaceae Populus euphratica 3 populus_peu12025, populus_peu18066, populus_peu31831
Solanaceae Lycium barbarum 4 gene-LOC132602509, gene-LOC132627599, gene-LOC132634783 ...
gene-LOC132645758
Solanaceae Solanum chilense 3 SOLCI001541700, SOLCI002945500, SOLCI004763700
Solanaceae Solanum pennellii 3 gene-LOC107001836, gene-LOC107015013, gene-LOC107015982
Tamaricaceae Reaumuria soongarica 2 STRG.8395_chr06_+, gene_1531
Tamaricaceae Tamarix chinensis 2 TC03G2599, TC09G2535
Zosteraceae Zostera marina 4 Zosma01g07290.v3.1, Zosma02g05750.v3.1, Zosma06g03820.v3.1 ...
Zosma06g19980.v3.1
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.