Basic Information
Locus ID:
nbis-gene-891
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
Speckle-type POZ protein-like protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00001.1 | 4067730 | 4068968 | + | nbis-gene-891 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.81 | 36,608.56 Da | 50.89 | 88.59 | -0.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00651 | BTB/POZ domain | 158 | 269 | 3.4E-28 | IPR000210 |
| SUPERFAMILY | SSF54695 | POZ domain | 146 | 269 | 1.66E-31 | IPR011333 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 142 | 268 | 3.2E-35 | IPR011333 |
| Gene3D | G3DSA:6.10.250.3030 | - | 269 | 313 | 6.3E-11 | - |
| SMART | SM00225 | BTB_4 | 164 | 271 | 1.7E-24 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 164 | 231 | 18.885712 | IPR000210 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G39760.1 | BTB/POZ/MATH-domains containing protein. | 0 |
| RefSeq | XP_039855205.1 | BTB/POZ and MATH domain-containing protein 1-like [Panicum virgatum] | 0 |
| O22286 | BTB/POZ and MATH domain-containing protein 3 OS=Arabidopsis thaliana OX=3702 GN=BPM3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3L6RLR8 | BTB/POZ and MATH domain-containing protein 2-like OS=Panicum miliaceum OX=4540 GN=C2845_PM13G06980 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_8AG0623030, gene-QOZ80_8BG0651030 |
| Poaceae | Paspalum vaginatum | 2 | gene-BS78_07G089700, gene-BS78_K171200 |
| Poaceae | Zoysia japonica | 2 | nbis-gene-51272, nbis-gene-891 |
| Poaceae | Zoysia macrostachya | 2 | Zma_g22660, Zma_g22661 |