HalophFGD

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Basic Information
Locus ID: nbis-gene-8560
Species & Taxonomic ID: Zoysia japonica & 309978
Genome Assembly: GCA_040438285.1
Description: Protein of unknown function (DUF1668)
Maps and Mapping Data
Chromosome Start End Strand ID
Zjn_sc00007.1 1458353 1458710 - nbis-gene-8560
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
4.88 11,132.80 Da 47.55 98.38 0.09
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF07893 Protein of unknown function (DUF1668) 3 99 2.4E-16 IPR012871
Best hit
Source Best Hit ID Description E-value
RefSeq XP_044946419.1 uncharacterized protein LOC123395478 [Hordeum vulgare subsp. vulgare] 0
TrEMBL A0A5J9SGB5 DUF295 domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_56861 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology
Family Species Count Orthologous Genes
Poaceae Echinochloa crus-galli 7 AH03.3014, AH07.3729, BH01.3192, BH01.5005, BH07.3553 ...
CH07.3622, CH07.3623
Poaceae Eleusine coracana subsp. coracana 7 gene-QOZ80_2BG0204150, gene-QOZ80_2BG0205010 ...
gene-QOZ80_2BG0205430, gene-QOZ80_3AG0230710, gene-QOZ80_3AG0232630, gene-QOZ80_3BG0297150, gene-QOZ80_5AG0366800
Poaceae Hordeum vulgare 4 HORVU.MOREX.r3.5HG0462090.1.CDS1 ...
HORVU.MOREX.r3.5HG0473320.1.CDS1, HORVU.MOREX.r3.5HG0487520.1.CDS1, HORVU.MOREX.r3.6HG0558090.1.CDS1
Poaceae Lolium multiflorum 11 gene-QYE76_001971, gene-QYE76_002059, gene-QYE76_006007 ...
gene-QYE76_020283, gene-QYE76_020292, gene-QYE76_020323, gene-QYE76_020506, gene-QYE76_049928, gene-QYE76_059716, gene-QYE76_059718, gene-QYE76_065978
Poaceae Oryza coarctata 5 Oco01G002310, Oco01G005560, Oco02G005640, Oco04G002260 ...
Oco06G026770
Poaceae Oryza sativa 12 LOC_Os01g12330.1, LOC_Os02g04900.1, LOC_Os02g05070.1 ...
LOC_Os02g05080.1, LOC_Os02g05120.1, LOC_Os02g05190.1, LOC_Os02g05350.1, LOC_Os02g05360.1, LOC_Os02g05430.1, LOC_Os02g05810.2, LOC_Os03g08690.1, LOC_Os03g13984.1
Poaceae Paspalum vaginatum 4 gene-BS78_04G301100, gene-BS78_04G304500 ...
gene-BS78_04G305700, gene-BS78_10G161300
Poaceae Puccinellia tenuiflora 6 Pt_Chr0202690, Pt_Chr0202744, Pt_Chr0202745, Pt_Chr0202746 ...
Pt_Chr0202801, Pt_Chr0207429
Poaceae Sporobolus alterniflorus 5 Chr01G017040, Chr06G000270, Chr0G032880, Chr15G001470 ...
Chr18G011610
Poaceae Thinopyrum elongatum 3 Tel2E01G250300, Tel3E01G567200, Tel3E01G567700
Poaceae Triticum dicoccoides 1 gene_TRIDC3BG025440
Poaceae Triticum aestivum 17 TraesCS1A02G191000.1.cds1, TraesCS1A02G293700.1.cds1 ...
TraesCS1B02G302800.1.cds1, TraesCS1D02G298200.1.cds1, TraesCS2A02G113300.1.cds1, TraesCS2A02G113400.1.cds1, TraesCS2A02G118900.1.cds1, TraesCS2D02G113800.1.cds1, TraesCS2D02G116400.1.cds1, TraesCS3A02G436700.1.cds1, TraesCS3B02G387100.1.cds1, TraesCS3B02G387300.1.cds1, TraesCS3B02G402300.1, TraesCS3D02G363300.1, TraesCS5A02G038600.1.cds1, TraesCS5B02G040200.1.cds1, TraesCS6B02G142300.1.cds1
Poaceae Zoysia japonica 4 nbis-gene-25157, nbis-gene-58900, nbis-gene-59033 ...
nbis-gene-8560
Poaceae Zoysia macrostachya 2 Zma_g28580, Zma_g28590
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