Basic Information
Locus ID:
nbis-gene-822
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
Cysteine-rich receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00001.1 | 3742336 | 3745419 | - | nbis-gene-822 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.21 | 32,027.88 Da | 48.96 | 78.72 | -0.16 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01657 | Salt stress response/antifungal | 165 | 255 | 1.4E-10 | IPR002902 |
| Pfam | PF01657 | Salt stress response/antifungal | 41 | 137 | 3.6E-12 | IPR002902 |
| Gene3D | G3DSA:3.30.430.20 | - | 36 | 140 | 8.3E-16 | IPR038408 |
| Gene3D | G3DSA:3.30.430.20 | - | 154 | 258 | 2.7E-17 | IPR038408 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 36 | 140 | 15.330181 | IPR002902 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 147 | 259 | 14.949993 | IPR002902 |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G05200.1 | cysteine-rich RLK (RECEPTOR-like protein kinase) 25. Encodes a cysteine-rich receptor-like protein kinase. | 0 |
| RefSeq | XP_008667806.1 | uncharacterized protein LOC100279706 isoform X1 [Zea mays] | 0 |
| Q0D5R3 | Cysteine-rich receptor-like protein kinase 6 OS=Oryza sativa subsp. japonica OX=39947 GN=CRK6 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J9VRH4 | Protein kinase domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_12145 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 4 | AH03.3238, BH03.3419, BH03.3423, BH03.3425 |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_7AG0570310, gene-QOZ80_7BG0602060 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.2HG0139070.1 |
| Poaceae | Oryza coarctata | 2 | Oco13G009180, Oco14G009600 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_02G300500 |
| Poaceae | Puccinellia tenuiflora | 1 | Pt_Chr0304235 |
| Poaceae | Sporobolus alterniflorus | 2 | Chr19G005290, Chr27G011970 |
| Poaceae | Thinopyrum elongatum | 1 | Tel2E01G406000 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC2AG028920, gene_TRIDC2AG028930 |
| Poaceae | Triticum aestivum | 3 | TraesCS2A02G217600.1, TraesCS2B02G243100.1 ... |
| Poaceae | Zea mays | 1 | Zm00001eb106320_P001 |
| Poaceae | Zoysia japonica | 1 | nbis-gene-822 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g6568 |