Basic Information
Locus ID:
nbis-gene-819
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
Salt stress response/antifungal
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00001.1 | 3724552 | 3727107 | - | nbis-gene-819 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.80 | 29,702.89 Da | 32.33 | 71.66 | -0.18 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01657 | Salt stress response/antifungal | 17 | 110 | 1.5E-9 | IPR002902 |
| Gene3D | G3DSA:3.30.430.20 | - | 4 | 113 | 3.5E-18 | IPR038408 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 128 | 224 | 2.5E-6 | - |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 4 | 113 | 17.059134 | IPR002902 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 251 | 266 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 237 | 266 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G23280.3 | - | 0 |
| RefSeq | XP_034582438.1 | cysteine-rich receptor-like protein kinase 19 [Setaria viridis] | 0 |
| O65479 | Putative cysteine-rich receptor-like protein kinase 20 OS=Arabidopsis thaliana OX=3702 GN=CRK20 PE=2 SV=2 | 0 | |
| TrEMBL | A0A5J9VR44 | Gnk2-homologous domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_12037 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 4 | AH03.3243, BH03.3430, CH03.3635, CH03.3636 |
| Poaceae | Eleusine coracana subsp. coracana | 3 | gene-QOZ80_7AG0570270, gene-QOZ80_7AG0570320 ... |
| Poaceae | Hordeum vulgare | 2 | HORVU.MOREX.r3.2HG0139040.1, HORVU.MOREX.r3.7HG0638110.1 |
| Poaceae | Lolium multiflorum | 2 | gene-QYE76_040820, gene-QYE76_040848 |
| Poaceae | Oryza coarctata | 2 | Oco13G009240, Oco14G009630 |
| Poaceae | Oryza sativa | 1 | LOC_Os07g35140.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_02G301000 |
| Poaceae | Puccinellia tenuiflora | 1 | Pt_Chr0304253 |
| Poaceae | Sporobolus alterniflorus | 2 | Chr19G005260, Chr27G012000 |
| Poaceae | Thinopyrum elongatum | 2 | Tel2E01G1046700, Tel2E01G404800 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC2AG028890, gene_TRIDC2BG032550 |
| Poaceae | Triticum aestivum | 7 | TraesCS2A02G217200.1, TraesCS2A02G562800.1 ... |
| Poaceae | Zea mays | 2 | Zm00001eb323230_P001, Zm00001eb323240_P003 |
| Poaceae | Zoysia japonica | 1 | nbis-gene-819 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g6572 |