Basic Information
Locus ID:
nbis-gene-8071
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Short Name:
PHOT2
Description:
Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00006.1 | 3993872 | 4007509 | + | nbis-gene-8071 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.88 | 19,883.62 Da | 39.38 | 93.51 | -0.47 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 88 | 139 | 1.1E-15 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 89 | 140 | 5.93E-19 | IPR011009 |
| SUPERFAMILY | SSF55785 | PYP-like sensor domain (PAS domain) | 5 | 43 | 3.35E-5 | IPR035965 |
| Gene3D | G3DSA:3.30.450.20 | PAS domain | 1 | 51 | 6.0E-12 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 88 | 134 | 8.1E-20 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 174 | 13.630136 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 108 | 120 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G58140.3 | phototropin 2. Membrane-bound protein serine/threonine kinase that functions as blue light photoreceptor in redundancy with PHO1. Involved in stomatal opening, chloroplast movement and phototropism. Mediates blue light-induced growth enhancements. PHOT1 and PHOT2 mediate blue light-dependent activation of the plasma membrane H+-ATPase in guard cell protoplasts. PHOT2 possesses two LOV (LOV1 and LOV2, for light-oxygen-voltage-sensing) domains involved in FMN-binding and a C-terminus forming a serine/threonine kinase domain. LOV2 acts as an inhibitor of phototropin kinase in the dark, and light cancels the inhibition through cysteine-FMN adduct formation. LOV1 in contrast acts as an attenuator of photoactivation. Localized to the Golgi apparatus under the induction of blue light. | 0 |
| RefSeq | XP_048557156.1 | phototropin-2 isoform X2 [Triticum urartu] | 0 |
| Q9ST27 | Phototropin-2 OS=Oryza sativa subsp. japonica OX=39947 GN=PHOT2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A1E5WNC2 | Phototropin-2 OS=Dichanthelium oligosanthes OX=888268 GN=BAE44_0000101 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Salicornia bigelovii | 9 | Sbi_jg12034, Sbi_jg23301, Sbi_jg26053, Sbi_jg31441 ... |
| Amaranthaceae | Salicornia europaea | 2 | Seu_jg12929, Seu_jg25019 |
| Poaceae | Zea mays | 1 | Zm00001eb187930_P001 |
| Poaceae | Zoysia japonica | 1 | nbis-gene-8071 |