Basic Information
Locus ID:
nbis-gene-7962
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
protein modification by small protein conjugation or removal
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00006.1 | 3103882 | 3105705 | + | nbis-gene-7962 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.24 | 46,955.40 Da | 37.60 | 84.00 | -0.20 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00121 | MATH | 5 | 128 | 8.17329E-12 | IPR002083 |
| Pfam | PF00651 | BTB/POZ domain | 159 | 287 | 5.3E-22 | IPR000210 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 25 | 129 | 7.19E-10 | - |
| SUPERFAMILY | SSF54695 | POZ domain | 147 | 289 | 1.54E-29 | IPR011333 |
| Gene3D | G3DSA:1.25.40.420 | - | 288 | 357 | 7.6E-18 | - |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 5 | 130 | 5.5E-11 | IPR008974 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 144 | 284 | 2.4E-33 | IPR011333 |
| SMART | SM00225 | BTB_4 | 167 | 289 | 2.0E-23 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 167 | 252 | 17.996386 | IPR000210 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G06190.1 | BTB-POZ and MATH domain 2. | 0 |
| RefSeq | XP_004979707.1 | BTB/POZ and MATH domain-containing protein 1 [Setaria italica] | 0 |
| Q9M8J9 | BTB/POZ and MATH domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=BPM2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0A9P952 | BTB domain-containing protein OS=Arundo donax OX=35708 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Eleusine coracana subsp. coracana | 3 | gene-QOZ80_4AG0321680, gene-QOZ80_4AG0321870 ... |
| Poaceae | Paspalum vaginatum | 3 | gene-BS78_01G227200, gene-BS78_05G092100 ... |
| Poaceae | Sporobolus alterniflorus | 1 | Chr25G013180 |
| Poaceae | Zea mays | 1 | Zm00001eb166870_P001 |
| Poaceae | Zoysia japonica | 1 | nbis-gene-7962 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g21111 |