Basic Information
Locus ID:
nbis-gene-7775
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00006.1 | 2027599 | 2028777 | + | nbis-gene-7775 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.83 | 39,040.63 Da | 69.77 | 55.79 | -0.37 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | mobidb-lite | consensus disorder prediction | 357 | 392 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 158 | 235 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 67 | 91 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 158 | 176 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 63 | 142 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 263 | 291 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 358 | 392 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G06868.1 | 0 | |
| RefSeq | XP_025824689.1 | gametogenetin-like [Panicum hallii] | 0 |
| TrEMBL | A0A2T7CUI4 | Zinc finger CCCH domain-containing protein 18 OS=Panicum hallii var. hallii OX=1504633 GN=GQ55_7G128900 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 4 | jg11240, jg12407, jg28050, jg5665 |
| Aizoaceae | Mesembryanthemum crystallinum | 1 | gene_18798 |
| Amaranthaceae | Atriplex hortensis | 1 | Ah017933 |
| Amaranthaceae | Salicornia bigelovii | 2 | Sbi_jg59929, Sbi_jg62876 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg23982 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00026074 |
| Amaranthaceae | Suaeda glauca | 4 | Sgl03409, Sgl03416, Sgl08453, Sgl08537 |
| Amaranthaceae | Chenopodium album | 2 | gene:ENSEOMG00000032124, gene:ENSEOMG00000044565 |
| Amaranthaceae | Chenopodium quinoa | 2 | CQ.Regalona.r1.8AG0004340, CQ.Regalona.r1.8BG0004660 |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30234240 |
| Apiaceae | Apium graveolens | 4 | Ag5G02411, Ag9G01874, AgUnG00053, AgUnG00483 |
| Arecaceae | Cocos nucifera | 2 | COCNU_06G014560, scaffold001941G000010 |
| Arecaceae | Phoenix dactylifera | 1 | gene-LOC103703681 |
| Asparagaceae | Asparagus officinalis | 3 | AsparagusV1_02.1411.V1.1, AsparagusV1_06.1187.V1.1 ... |
| Asteraceae | Flaveria trinervia | 2 | Ftri14G06556, Ftri7G27629 |
| Brassicaceae | Arabidopsis thaliana | 2 | AT3G06868.1, AT5G49100.1 |
| Brassicaceae | Eutrema salsugineum | 2 | Thhalv10004314m.g.v1.0, Thhalv10021990m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 2 | Sp2g19450.v2.2, Sp3g05830.v2.2 |
| Brassicaceae | Brassica nigra | 5 | BniB01g056900.2N, BniB02g070110.2N, BniB03g024340.2N ... |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq09G1125 |
| Cymodoceaceae | Cymodocea nodosa | 2 | gene.Cymno05g03790, gene.Cymno07g10870 |
| Hydrocharitaceae | Thalassia testudinum | 1 | gene.Thate04g02970 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG11.1289 |
| Plantaginaceae | Plantago ovata | 2 | Pov_00022653, Pov_00026109 |
| Poaceae | Echinochloa crus-galli | 4 | AH07.2006, BH07.1977, CH03.4294, CH09.1063 |
| Poaceae | Eleusine coracana subsp. coracana | 4 | gene-QOZ80_2AG0132570, gene-QOZ80_2BG0187960 ... |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.2HG0165250.1.CDS1 |
| Poaceae | Oryza coarctata | 4 | Oco03G011400, Oco04G011800, Oco07G004980, Oco08G004970 |
| Poaceae | Oryza sativa | 2 | LOC_Os02g32550.1, LOC_Os04g33260.1 |
| Poaceae | Paspalum vaginatum | 2 | gene-BS78_04G149000, gene-BS78_06G081900 |
| Poaceae | Sporobolus alterniflorus | 7 | Chr06G010760, Chr09G015410, Chr13G011330, Chr23G013950 ... |
| Poaceae | Thinopyrum elongatum | 1 | Tel2E01G518500 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC2AG042200, gene_TRIDC2BG045280 |
| Poaceae | Triticum aestivum | 3 | TraesCS2A02G291400.1.cds1, TraesCS2B02G307900.1.cds1 ... |
| Poaceae | Zea mays | 3 | Zm00001eb084360_P001, Zm00001eb242460_P001 ... |
| Poaceae | Zoysia japonica | 4 | nbis-gene-18914, nbis-gene-20846, nbis-gene-37957 ... |
| Poaceae | Zoysia macrostachya | 4 | Zma_g13605, Zma_g16397, Zma_g19631, Zma_g21208 |
| Portulacaceae | Portulaca oleracea | 5 | evm.TU.LG08.28, evm.TU.LG10.1570, evm.TU.LG13.946 ... |
| Posidoniaceae | Posidonia oceanica | 2 | gene.Posoc01g08200, gene.Posoc05g07040 |
| Rhizophoraceae | Bruguiera sexangula | 2 | evm.TU.Scaffold_3_RagTag.593, evm.TU.Scaffold_6_RagTag.590 |
| Rhizophoraceae | Carallia pectinifolia | 4 | nbisL1-mrna-1372, nbisL1-mrna-16098, nbisL1-mrna-28174 ... |
| Rhizophoraceae | Ceriops tagal | 2 | nbisL1-mrna-15882, nbisL1-mrna-17215 |
| Rhizophoraceae | Ceriops zippeliana | 2 | nbisL1-mrna-486, nbisL1-mrna-6302 |
| Rhizophoraceae | Kandelia candel | 2 | add.evm.TU.utg000011l.143, add.evm.TU.utg000019l.359 |
| Rhizophoraceae | Kandelia obovata | 2 | Maker00007960, Maker00012753 |
| Rhizophoraceae | Rhizophora apiculata | 2 | nbisL1-mrna-21610, nbisL1-mrna-22284 |
| Rhizophoraceae | Rhizophora mangle | 2 | nbisL1-mrna-18192, nbisL1-mrna-3652 |
| Salicaceae | Populus euphratica | 3 | populus_peu08062, populus_peu22224, populus_peu22235 |
| Solanaceae | Lycium barbarum | 3 | gene-LOC132604519, gene-LOC132626782, gene-LOC132642212 |
| Solanaceae | Solanum chilense | 2 | SOLCI000183400, SOLCI005285900 |
| Solanaceae | Solanum pennellii | 2 | gene-LOC107005719, gene-LOC107009212 |
| Tamaricaceae | Reaumuria soongarica | 1 | STRG.3570_chr02_+ |
| Tamaricaceae | Tamarix chinensis | 1 | TC12G1649 |
| Zosteraceae | Zostera marina | 3 | Zosma03g15140.v3.1, Zosma04g02220.v3.1, Zosma05g08690.v3.1 |