Basic Information
Locus ID:
nbis-gene-7108
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
Protein of unknown function (DUF295)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00005.1 | 4860768 | 4863245 | - | nbis-gene-7108 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.22 | 59,448.98 Da | 40.97 | 66.82 | -0.35 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF81383 | F-box domain | 155 | 213 | 1.3E-5 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 155 | 193 | 1.1E-5 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 20 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 56 | 76 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 333 | 375 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 91 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 39 | 55 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 333 | 369 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_025815679.1 | F-box protein SKIP23-like [Panicum hallii] | 0 |
| TrEMBL | A0A5J9UFS7 | DUF295 domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_31869 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 3 | AH02.1208, AH08.1331, CH02.1010 |
| Poaceae | Eleusine coracana subsp. coracana | 3 | gene-QOZ80_1AG0007570, gene-QOZ80_1BG0056360 ... |
| Poaceae | Hordeum vulgare | 2 | HORVU.MOREX.r3.4HG0340140.1.CDS1 ... |
| Poaceae | Sporobolus alterniflorus | 3 | Chr05G002560, Chr05G002570, Chr05G002580 |
| Poaceae | Thinopyrum elongatum | 2 | Tel4E01G107500, Tel6E01G347500 |
| Poaceae | Triticum aestivum | 1 | TraesCS4D02G064300.1.cds1 |
| Poaceae | Zoysia japonica | 2 | nbis-gene-14992, nbis-gene-7108 |