Basic Information
Locus ID:
nbis-gene-6803
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
The B regulatory subunit might modulate substrate selectivity and catalytic activity, and also might direct the localization of the catalytic enzyme to a particular subcellular compartment
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00005.1 | 3430159 | 3432696 | + | nbis-gene-6803 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.62 | 35,303.91 Da | 50.64 | 69.20 | -0.47 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01603 | Protein phosphatase 2A regulatory B subunit (B56 family) | 259 | 303 | 3.5E-14 | IPR002554 |
| Pfam | PF01603 | Protein phosphatase 2A regulatory B subunit (B56 family) | 65 | 258 | 3.7E-74 | IPR002554 |
| SUPERFAMILY | SSF48371 | ARM repeat | 67 | 303 | 9.46E-83 | IPR016024 |
| Gene3D | G3DSA:1.25.10.10 | - | 259 | 309 | 4.1E-15 | IPR011989 |
| Gene3D | G3DSA:1.25.10.10 | - | 63 | 258 | 5.6E-78 | IPR011989 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 10 | 24 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 65 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 27 | 41 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
KEGG Pathway
Pathway:
ko03015 (mRNA surveillance pathway)
map03015 (mRNA surveillance pathway)
ko04071 (Sphingolipid signaling pathway)
map04071 (Sphingolipid signaling pathway)
ko04113 (Meiosis - yeast)
map04113 (Meiosis - yeast)
ko04114 (Oocyte meiosis)
map04114 (Oocyte meiosis)
ko04151 (PI3K-Akt signaling pathway)
map04151 (PI3K-Akt signaling pathway)
ko04152 (AMPK signaling pathway)
map04152 (AMPK signaling pathway)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G25510.1 | Protein phosphatase 2A regulatory B subunit family protein. | 0 |
| RefSeq | XP_004968416.1 | serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' kappa isoform [Setaria italica] | 0 |
| Q93YV6 | Serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' kappa isoform OS=Arabidopsis thaliana OX=3702 GN=B'KAPPA PE=1 SV=1 | 0 | |
| TrEMBL | A0A0A8ZL80 | Serine/threonine protein phosphatase 2A regulatory subunit OS=Arundo donax OX=35708 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology