Basic Information
Locus ID:
nbis-gene-651
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
Calcium-dependent protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00001.1 | 2868184 | 2871563 | + | nbis-gene-651 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.54 | 39,921.05 Da | 34.58 | 73.86 | -0.51 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00051 | EFh | 260 | 322 | 7.63288E-17 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 259 | 322 | 3.2E-14 | IPR002048 |
| Pfam | PF00069 | Protein kinase domain | 104 | 202 | 1.6E-31 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 51 | 199 | 2.28E-43 | IPR011009 |
| SUPERFAMILY | SSF47473 | EF-hand | 227 | 333 | 9.08E-26 | IPR011992 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 56 | 103 | 1.3E-8 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 251 | 321 | 8.4E-26 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 104 | 234 | 5.1E-35 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 235 | 250 | 8.4E-26 | - |
| SMART | SM00054 | efh_1 | 296 | 324 | 6.6E-6 | IPR002048 |
| SMART | SM00054 | efh_1 | 224 | 252 | 3.7 | IPR002048 |
| SMART | SM00054 | efh_1 | 260 | 288 | 1.2 | IPR002048 |
| SMART | SM00220 | serkin_6 | 59 | 246 | 1.1E-13 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 246 | 21.191826 | IPR000719 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 256 | 291 | 11.500702 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 292 | 327 | 14.234451 | IPR002048 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 65 | 88 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 110 | 122 | - | IPR008271 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 233 | 245 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 269 | 281 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 305 | 317 | - | IPR018247 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 33 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G19450.1 | calcium-dependent protein kinase 19. calcium-dependent protein kinase (CDPK19) mRNA, complete | 0 |
| RefSeq | XP_025802338.1 | calcium-dependent protein kinase 20 [Panicum hallii] | 0 |
| Q84SL0 | Calcium-dependent protein kinase 20 OS=Oryza sativa subsp. japonica OX=39947 GN=CPK20 PE=2 SV=2 | 0 | |
| TrEMBL | A0A3L6QQK2 | Calcium-dependent protein kinase 30 OS=Panicum miliaceum OX=4540 GN=C2845_PM04G29770 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology