Basic Information
Locus ID:
nbis-gene-6508
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00005.1 | 1630384 | 1634644 | - | nbis-gene-6508 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.17 | 51,449.84 Da | 42.22 | 81.06 | -0.47 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 192 | 352 | 8.1E-33 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 173 | 417 | 1.62E-59 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 351 | 428 | 5.4E-9 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 267 | 350 | 6.0E-27 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 174 | 266 | 2.1E-34 | - |
| SMART | SM00220 | serkin_6 | 191 | 413 | 2.7E-12 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 191 | 464 | 27.241177 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 197 | 220 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 313 | 325 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 101 | 127 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 399 | 454 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 399 | 464 | - | - |
| Coils | Coil | Coil | 464 | 464 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G56720.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_004968653.1 | probable receptor-like protein kinase At5g18500 [Setaria italica] | 0 |
| Q8LEB6 | Probable receptor-like protein kinase At5g18500 OS=Arabidopsis thaliana OX=3702 GN=At5g18500 PE=2 SV=1 | 0 | |
| TrEMBL | A0A5J9UC18 | Protein kinase domain-containing protein OS=Eragrostis curvula OX=38414 GN=EJB05_30722 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology