Basic Information
Locus ID:
nbis-gene-6507
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
Belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00005.1 | 1626757 | 1629228 | + | nbis-gene-6507 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 10.21 | 28,022.53 Da | 51.15 | 74.29 | -0.48 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 174 | 256 | 1.8E-11 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 152 | 256 | 1.54E-22 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 140 | 244 | 1.2E-27 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 170 | 259 | 12.216737 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 176 | 198 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 93 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 15 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G48210.4 | - | 0 |
| RefSeq | XP_004968655.1 | pto-interacting protein 1 isoform X2 [Setaria italica] | 0 |
| Q41328 | Pto-interacting protein 1 OS=Solanum lycopersicum OX=4081 GN=PTI1 PE=1 SV=2 | 0 | |
| TrEMBL | A0A835E4V5 | Protein kinase domain-containing protein OS=Digitaria exilis OX=1010633 GN=HU200_056704 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Chenopodium album | 1 | gene:ENSEOMG00000019593 |
| Poaceae | Sporobolus alterniflorus | 1 | Chr03G006670 |
| Poaceae | Zoysia japonica | 1 | nbis-gene-6507 |