Basic Information
Locus ID:
nbis-gene-6252
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00004.1 | 6091138 | 6097747 | - | nbis-gene-6252 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.56 | 54,007.25 Da | 49.69 | 85.42 | -0.53 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 333 | 448 | 1.7E-29 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 272 | 456 | 8.14E-38 | IPR011009 |
| SUPERFAMILY | SSF55021 | ACT-like | 175 | 242 | 4.17E-8 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 265 | 334 | 3.2E-6 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 335 | 458 | 1.9E-33 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 189 | 460 | 17.121233 | IPR000719 |
| ProSiteProfiles | PS51671 | ACT domain profile. | 177 | 251 | 12.90287 | IPR002912 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 108 | 143 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 112 | 134 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 32 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G17700.1 | ACT-like protein tyrosine kinase family protein. | 0 |
| RefSeq | XP_025824934.1 | serine/threonine-protein kinase STY8-like isoform X2 [Panicum hallii] | 0 |
| O22558 | Serine/threonine-protein kinase STY8 OS=Arabidopsis thaliana OX=3702 GN=STY8 PE=1 SV=2 | 0 | |
| TrEMBL | K3ZE75 | Serine/threonine-protein kinase STY8 OS=Setaria italica OX=4555 GN=101769300 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 1 | jg23072 |
| Aizoaceae | Mesembryanthemum crystallinum | 1 | gene_22877 |
| Amaranthaceae | Atriplex hortensis | 1 | Ah024374 |
| Amaranthaceae | Beta vulgaris | 1 | BVRB_1g011310 |
| Amaranthaceae | Salicornia bigelovii | 2 | Sbi_jg38909, Sbi_jg54217 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg10793 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00023740 |
| Amaranthaceae | Suaeda glauca | 3 | Sgl10161, Sgl15313, Sgl15363 |
| Amaranthaceae | Chenopodium album | 3 | gene:ENSEOMG00000013155, gene:ENSEOMG00000035227 ... |
| Amaranthaceae | Chenopodium quinoa | 2 | CQ.Regalona.r1.1AG0014280, CQ.Regalona.r1.1BG0011760 |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30038040 |
| Apiaceae | Apium graveolens | 2 | Ag3G01125, AgUnG00309 |
| Arecaceae | Cocos nucifera | 1 | COCNU_15G001460 |
| Arecaceae | Phoenix dactylifera | 2 | gene-LOC103701194, gene-LOC103704336 |
| Asparagaceae | Asparagus officinalis | 2 | AsparagusV1_09.146.V1.1, AsparagusV1_10.1676.V1.1 |
| Asteraceae | Flaveria trinervia | 1 | Ftri16G28737 |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq03G1959 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl03G2106 |
| Cymodoceaceae | Cymodocea nodosa | 1 | gene.Cymno08g08170 |
| Hydrocharitaceae | Thalassia testudinum | 2 | gene.Thate01g28500, gene.Thate09g01810 |
| Malvaceae | Hibiscus hamabo Siebold & Zucc. | 1 | nbisL1-mrna-12253 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG06.724 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00023006 |
| Poaceae | Echinochloa crus-galli | 10 | AH04.310, AH05.269, AH08.25, BH01.1418, BH04.361, BH05.313 ... |
| Poaceae | Eleusine coracana subsp. coracana | 8 | gene-QOZ80_4AG0298610, gene-QOZ80_4BG0329310 ... |
| Poaceae | Hordeum vulgare | 3 | HORVU.MOREX.r3.2HG0214820.1, HORVU.MOREX.r3.5HG0458010.1 ... |
| Poaceae | Lolium multiflorum | 4 | gene-QYE76_002961, gene-QYE76_011103, gene-QYE76_033664 ... |
| Poaceae | Oryza coarctata | 5 | Oco07G019840, Oco21G001770, Oco22G002620, Oco23G002350 ... |
| Poaceae | Oryza sativa | 3 | LOC_Os04g59000.1, LOC_Os08g01270.1, LOC_Os12g06670.1 |
| Poaceae | Paspalum vaginatum | 3 | gene-BS78_05G061300, gene-BS78_06G292200 ... |
| Poaceae | Puccinellia tenuiflora | 2 | Pt_Chr0402733, Pt_Chr0703280 |
| Poaceae | Sporobolus alterniflorus | 10 | Chr04G022680, Chr06G024460, Chr16G009920, Chr17G008950 ... |
| Poaceae | Thinopyrum elongatum | 3 | Tel2E01G996100, Tel5E01G227700, Tel7E01G560200 |
| Poaceae | Triticum dicoccoides | 7 | gene_TRIDC2AG080090, gene_TRIDC2AG080130 ... |
| Poaceae | Triticum aestivum | 12 | TraesCS2A02G577000.1, TraesCS2A02G577200.1 ... |
| Poaceae | Zea mays | 5 | Zm00001eb139460_P002, Zm00001eb198810_P002 ... |
| Poaceae | Zoysia japonica | 4 | nbis-gene-25577, nbis-gene-41377, nbis-gene-46322 ... |
| Poaceae | Zoysia macrostachya | 4 | Zma_g22278, Zma_g23478, Zma_g24779, Zma_g25522 |
| Portulacaceae | Portulaca oleracea | 2 | evm.TU.LG04.1378, evm.TU.LG05.1902 |
| Posidoniaceae | Posidonia oceanica | 2 | gene.Posoc01g01280, gene.Posoc05g21050 |
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_7_RagTag.1215 |
| Rhizophoraceae | Carallia pectinifolia | 1 | nbisL1-mrna-18618 |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-1086 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-13191 |
| Rhizophoraceae | Kandelia candel | 1 | evm.TU.utg000002l.368 |
| Rhizophoraceae | Kandelia obovata | 1 | Maker00011605 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-8934 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-18419 |
| Salicaceae | Populus euphratica | 2 | populus_peu14863, populus_peu32538 |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132627294 |
| Solanaceae | Solanum chilense | 1 | SOLCI003896200 |
| Solanaceae | Solanum pennellii | 1 | gene-LOC107018048 |
| Tamaricaceae | Tamarix chinensis | 1 | TC03G2855 |
| Zosteraceae | Zostera marina | 2 | Zosma02g01600.v3.1, Zosma04g23940.v3.1 |