Basic Information
Locus ID:
nbis-gene-6236
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
cellular process
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00004.1 | 6026638 | 6033005 | + | nbis-gene-6236 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.12 | 24,529.53 Da | 43.93 | 77.89 | -0.36 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 102 | 197 | 6.98E-10 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 29 | 103 | 2.3E-16 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 104 | 209 | 5.4E-8 | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G63500.1 | Protein kinase protein with tetratricopeptide repeat domain. | 0 |
| RefSeq | XP_039819826.1 | probable serine/threonine-protein kinase BSK3 [Panicum virgatum] | 0 |
| B9FDE0 | Probable serine/threonine-protein kinase BSK3 OS=Oryza sativa subsp. japonica OX=39947 GN=BSK3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8T0Q4Q6 | Protein kinase domain-containing protein OS=Panicum virgatum OX=38727 GN=PVAP13_7NG447200 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Aizoaceae | Mesembryanthemum crystallinum | 3 | gene_17562, gene_6038, gene_8727 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00014196 |
| Asparagaceae | Asparagus officinalis | 2 | AsparagusV1_02.1847.V1.1, AsparagusV1_03.870.V1.1 |
| Plantaginaceae | Plantago ovata | 2 | Pov_00018224, Pov_00018314 |
| Poaceae | Sporobolus alterniflorus | 1 | Chr14G010560 |
| Poaceae | Zoysia japonica | 2 | nbis-gene-23234, nbis-gene-6236 |