Basic Information
Locus ID:
nbis-gene-608
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
Belongs to the glycosyl hydrolase 17 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00001.1 | 2685546 | 2689608 | - | nbis-gene-608 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.50 | 53,088.41 Da | 36.78 | 82.86 | 0.03 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00332 | Glycosyl hydrolases family 17 | 30 | 351 | 2.2E-73 | IPR000490 |
| Pfam | PF07983 | X8 domain | 368 | 439 | 1.4E-16 | IPR012946 |
| SUPERFAMILY | SSF51445 | (Trans)glycosidases | 30 | 351 | 2.19E-78 | IPR017853 |
| Gene3D | G3DSA:1.20.58.1040 | - | 365 | 461 | 2.4E-8 | - |
| Gene3D | G3DSA:3.20.20.80 | Glycosidases | 29 | 357 | 3.6E-111 | - |
| SMART | SM00768 | X8_cls | 367 | 452 | 3.8E-41 | IPR012946 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G13560.1 | O-Glycosyl hydrolases family 17 protein. | 0 |
| RefSeq | XP_021308936.1 | glucan endo-1,3-beta-glucosidase 4 [Sorghum bicolor] | 0 |
| Q94CD8 | Glucan endo-1,3-beta-glucosidase 4 OS=Arabidopsis thaliana OX=3702 GN=At3g13560 PE=2 SV=1 | 0 | |
| TrEMBL | K3ZSP8 | X8 domain-containing protein OS=Setaria italica OX=4555 GN=SETIT_2G366200v2 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology