Basic Information
Locus ID:
nbis-gene-58734
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
Legume lectin domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc09354.1 | 439 | 624 | - | nbis-gene-58734 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.61 | 7,469.62 Da | 47.14 | 103.55 | -0.37 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 4 | 54 | 1.2E-8 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 3 | 61 | 6.41E-15 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1 | 62 | 1.8E-14 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 62 | 9.248596 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G10530.1 | Concanavalin A-like lectin protein kinase family protein. | 0 |
| RefSeq | XP_021301270.1 | L-type lectin-domain containing receptor kinase IX.1 [Sorghum bicolor] | 0 |
| Q2QRN7 | Probable kinase CHARK OS=Oryza sativa subsp. japonica OX=39947 GN=CHARK PE=2 SV=1 | 0 | |
| TrEMBL | A0A3L6PT30 | L-type lectin-domain containing receptor kinase IX.1-like OS=Panicum miliaceum OX=4540 GN=C2845_PM16G02500 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 3 | jg265, jg28762, jg36600 |
| Aizoaceae | Mesembryanthemum crystallinum | 1 | gene_22847 |
| Amaranthaceae | Chenopodium album | 1 | gene:ENSEOMG00000011872 |
| Malvaceae | Hibiscus hamabo Siebold & Zucc. | 4 | nbisL1-mrna-5692, nbisL1-mrna-5695, nbisL1-mrna-5699 ... |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.2HG0199250.1 |
| Poaceae | Sporobolus alterniflorus | 1 | Chr20G012380 |
| Poaceae | Thinopyrum elongatum | 1 | Tel2E01G1011800 |
| Poaceae | Triticum dicoccoides | 1 | gene_TRIDC4BG055090 |
| Poaceae | Zea mays | 1 | Zm00001eb217820_P001 |
| Poaceae | Zoysia japonica | 2 | nbis-gene-58734, nbis-gene-58813 |