Basic Information
Locus ID:
nbis-gene-58672
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc08951.1 | 336 | 680 | + | nbis-gene-58672 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.00 | 12,758.36 Da | 22.91 | 80.52 | -0.43 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 26 | 109 | 1.3E-13 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 22 | 109 | 6.04E-19 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 19 | 96 | 1.0E-21 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 115 | 10.732666 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G01020.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_006655891.2 | serine/threonine-protein kinase RIPK-like [Oryza brachyantha] | 0 |
| Q8GXZ3 | Probable serine/threonine-protein kinase PBL8 OS=Arabidopsis thaliana OX=3702 GN=PBL8 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3L6EDF7 | Putative serine/threonine-protein kinase PBL12 OS=Zea mays OX=4577 GN=PBL12 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Hydrocharitaceae | Thalassia testudinum | 1 | gene.Thate05g25850 |
| Plumbaginaceae | Limonium bicolor | 1 | Lb3G16414 |
| Poaceae | Oryza coarctata | 1 | Oco12G004670 |
| Poaceae | Triticum dicoccoides | 1 | gene_TRIDC7AG020320 |
| Poaceae | Zea mays | 1 | Zm00001eb256760_P001 |
| Poaceae | Zoysia japonica | 4 | nbis-gene-30695, nbis-gene-40007, nbis-gene-57212 ... |
| Zosteraceae | Zostera marina | 1 | Zosma01g31040.v3.1 |