halophFGD

Basic Information

Locus ID: nbis-gene-58663

Species & Taxonomic ID: Zoysia japonica & 309978

Genome Assembly: GCA_040438285.1

Description: F-box protein

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
Zjn_sc08874.1	2	432	-	nbis-gene-58663

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
9.85	15,156.28 Da	64.23	99.78	-0.14

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF12937	F-box-like	88	122	2.9E-6	IPR001810
SUPERFAMILY	SSF81383	F-box domain	80	122	5.1E-9	IPR036047
Gene3D	G3DSA:1.20.1280.50	-	70	129	4.8E-7	-
MobiDBLite	mobidb-lite	consensus disorder prediction	15	36	-	-

Gene Ontology

Molecular Function:

GO:0005515 (protein binding)

Best hit

Source	Best Hit ID	Description	E-value
TAIR	AT5G46170.1	F-box family protein.	0
RefSeq	XP_039826555.1	F-box protein At4g18380-like [Panicum virgatum]	0
Swiss-Prot	Q9FNK5	F-box protein At5g46170 OS=Arabidopsis thaliana OX=3702 GN=At5g46170 PE=2 SV=1	0
TrEMBL	A0A8T0MVJ9	F-box domain-containing protein OS=Panicum virgatum OX=38727 GN=PVAP13_9NG608700 PE=4 SV=1	0

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

No network data available for this species.

Orthology

Family	Species	Count	Orthologous Genes
Poaceae	Thinopyrum elongatum	1	Tel7E01G1003300
Poaceae	Zoysia japonica	1	nbis-gene-58663